Information for 18-KSRGSTGKMRTRASAS (Motif 38)

C A T G A T G C C T A G C T A G A T G C A C G T A C T G A C G T G T C A C T G A C G A T C T A G G T C A A T G C C G T A A T G C
Reverse Opposite:
A T C G A C G T A T C G A C G T G A T C C G T A A G C T A C G T G T C A A G T C C G T A A T C G A G T C A G T C T A C G G T A C
p-value:1e-6
log p-value:-1.476e+01
Information Content per bp:1.737
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.8 +/- 23.9bp
Average Position of motif in Background25.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:KSRGSTGKMRTRASAS
----GTGGCGTGACNG
 C A T G A T G C C T A G C T A G A T G C A C G T A C T G A C G T G T C A C T G A C G A T C T A G G T C A A T G C C G T A A T G C
A C G T A C G T A C G T A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

Rhox11/MA0629.1/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--KSRGSTGKMRTRASAS
AAGACGCTGTAAAGCGA-
 A C G T A C G T C A T G A T G C C T A G C T A G A T G C A C G T A C T G A C G T G T C A C T G A C G A T C T A G G T C A A T G C C G T A A T G C
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A A C G T

PH0157.1_Rhox11_1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--KSRGSTGKMRTRASAS
AAGACGCTGTAAAGCGA-
 A C G T A C G T C A T G A T G C C T A G C T A G A T G C A C G T A C T G A C G T G T C A C T G A C G A T C T A G G T C A A T G C C G T A A T G C
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--KSRGSTGKMRTRASAS
AGGACGCTGTAAAGGGA-
 A C G T A C G T C A T G A T G C C T A G C T A G A T G C A C G T A C T G A C G T G T C A C T G A C G A T C T A G G T C A A T G C C G T A A T G C
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--KSRGSTGKMRTRASAS
NGTAGGTTGGCATNNN--
 A C G T A C G T C A T G A T G C C T A G C T A G A T G C A C G T A C T G A C G T G T C A C T G A C G A T C T A G G T C A A T G C C G T A A T G C
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:KSRGSTGKMRTRASAS
--AGGTGTCA------
 C A T G A T G C C T A G C T A G A T G C A C G T A C T G A C G T G T C A C T G A C G A T C T A G G T C A A T G C C G T A A T G C
A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--KSRGSTGKMRTRASAS
NNNCAGCTGTCAATATN-
 A C G T A C G T C A T G A T G C C T A G C T A G A T G C A C G T A C T G A C G T G T C A C T G A C G A T C T A G G T C A A T G C C G T A A T G C
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:KSRGSTGKMRTRASAS
----ATGGGGTGAT--
 C A T G A T G C C T A G C T A G A T G C A C G T A C T G A C G T G T C A C T G A C G A T C T A G G T C A A T G C C G T A A T G C
A C G T A C G T A C G T A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:KSRGSTGKMRTRASAS
--GGTTGGCAT-----
 C A T G A T G C C T A G C T A G A T G C A C G T A C T G A C G T G T C A C T G A C G A T C T A G G T C A A T G C C G T A A T G C
A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:KSRGSTGKMRTRASAS
----ATGGGGTGAT--
 C A T G A T G C C T A G C T A G A T G C A C G T A C T G A C G T G T C A C T G A C G A T C T A G G T C A A T G C C G T A A T G C
A C G T A C G T A C G T A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T A C G T