Information for 15-GGACATATTCACGTGT (Motif 33)

A C T G A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C G T A G T C C G T A G A T C C T A G C G A T C T A G C G A T
Reverse Opposite:
C G T A A G T C C G T A A G T C C A T G A C G T A C T G C G T A G T C A A C G T C G T A A C G T C T A G C G A T A G T C G T A C
p-value:1e-6
log p-value:-1.610e+01
Information Content per bp:1.820
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.0 +/- 29.6bp
Average Position of motif in Background59.8 +/- 18.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GGACATATTCACGTGT
--GHATATKCAT----
 A C T G A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C G T A G T C C G T A G A T C C T A G C G A T C T A G C G A T
A C G T A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGACATATTCACGTGT-
GACCACATTCATACAAT
 A C T G A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C G T A G T C C G T A G A T C C T A G C G A T C T A G C G A T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

PB0178.1_Sox8_2/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GGACATATTCACGTGT--
----ACATTCATGACACG
 A C T G A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C G T A G T C C G T A G A T C C T A G C G A T C T A G C G A T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GGACATATTCACGTGT
--GAATATTCAT----
 A C T G A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C G T A G T C C G T A G A T C C T A G C G A T C T A G C G A T
A C G T A C G T T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T A C G T A C G T

PB0163.1_Six6_2/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGACATATTCACGTGT
ATGGGATATATCCGCCT--
 A C G T A C G T A C G T A C T G A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C G T A G T C C G T A G A T C C T A G C G A T C T A G C G A T
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T A C G T A C G T

PB0007.1_Bhlhb2_1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGACATATTCACGTGT-------
-GGAAGAGTCACGTGACCAATAC
 A C T G A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C G T A G T C C G T A G A T C C T A G C G A T C T A G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C T A G G C T A C G T A A C T G C T G A C T A G C A G T G T A C C T G A A G T C T C A G G A C T A C T G G T C A A T G C A G T C G T C A T C G A G A C T C G T A G A T C

Arntl/MA0603.1/Jaspar

Match Rank:7
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GGACATATTCACGTGT
------GGTCACGTGC
 A C T G A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C G T A G T C C G T A G A T C C T A G C G A T C T A G C G A T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C

Mitf/MA0620.1/Jaspar

Match Rank:8
Score:0.56
Offset:6
Orientation:forward strand
Alignment:GGACATATTCACGTGT
------GGTCACGTGG
 A C T G A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C G T A G T C C G T A G A T C C T A G C G A T C T A G C G A T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G

TFE3/MA0831.1/Jaspar

Match Rank:9
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:GGACATATTCACGTGT-
-------GTCACGTGNT
 A C T G A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C G T A G T C C G T A G A T C C T A G C G A T C T A G C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T T G A C C G T A A G T C T C A G C G A T A T C G T C G A A G C T

TFEB/MA0692.1/Jaspar

Match Rank:10
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:GGACATATTCACGTGT-
-------GTCACGTGAT
 A C T G A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C G T A G T C C G T A G A T C C T A G C G A T C T A G C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C G T T G A C C G T A A G T C T C A G C A G T C A T G T C G A A G C T