Information for 10-CGAGGCYGGTGAC (Motif 19)

A G T C A C T G C G T A A C T G A C T G G T A C A G C T A C T G A C T G A C G T A C T G C T G A G T A C
Reverse Opposite:
A C T G A G C T A G T C C G T A A G T C A G T C C T A G A C T G A G T C A G T C C G A T A G T C C T A G
p-value:1e-9
log p-value:-2.291e+01
Information Content per bp:1.856
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.0 +/- 15.4bp
Average Position of motif in Background65.4 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CGAGGCYGGTGAC-
--SDGCAGGTGCNS
 A G T C A C T G C G T A A C T G A C T G G T A C A G C T A C T G A C T G A C G T A C T G C T G A G T A C A C G T
A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CGAGGCYGGTGAC-----
---GGGCGATGACCAYTC
 A G T C A C T G C G T A A C T G A C T G G T A C A G C T A C T G A C T G A C G T A C T G C T G A G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T A C G T C A G A G T C A C T G T G C A A G C T A C T G G T C A G T A C G A T C C T G A A G T C A C G T A T G C

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CGAGGCYGGTGAC--
-NAGGTCANTGACCT
 A G T C A C T G C G T A A C T G A C T G G T A C A G C T A C T G A C T G A C G T A C T G C T G A G T A C A C G T A C G T
A C G T T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CGAGGCYGGTGAC
---NNCAGGTGNN
 A G T C A C T G C G T A A C T G A C T G G T A C A G C T A C T G A C T G A C G T A C T G C T G A G T A C
A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

PB0151.1_Myf6_2/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CGAGGCYGGTGAC
GGNGCGNCTGTTNNN
 A C G T A C G T A G T C A C T G C G T A A C T G A C T G G T A C A G C T A C T G A C T G A C G T A C T G C T G A G T A C
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

EGR1/MA0162.2/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CGAGGCYGGTGAC
GGCGGGGGCGGGGG-
 A C G T A C G T A G T C A C T G C G T A A C T G A C T G G T A C A G C T A C T G A C T G A C G T A C T G C T G A G T A C
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G A C G T

HINFP/MA0131.2/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CGAGGCYGGTGAC
NCGCGGACGTTG--
 A C G T A G T C A C T G C G T A A C T G A C T G G T A C A G C T A C T G A C T G A C G T A C T G C T G A G T A C
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CGAGGCYGGTGAC
---GACAGGTGTN
 A G T C A C T G C G T A A C T G A C T G G T A C A G C T A C T G A C T G A C G T A C T G C T G A G T A C
A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A

SNAI2/MA0745.1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CGAGGCYGGTGAC
---AACAGGTGT-
 A G T C A C T G C G T A A C T G A C T G G T A C A G C T A C T G A C T G A C G T A C T G C T G A G T A C
A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CGAGGCYGGTGAC
---RTCATGTGAC
 A G T C A C T G C G T A A C T G A C T G G T A C A G C T A C T G A C T G A C G T A C T G C T G A G T A C
A C G T A C G T A C G T T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C