Information for 2-GGGTAAGAGA (Motif 16)

A C T G A C T G A C T G C A G T C T G A C T G A A T C G C T G A A C T G C G T A
Reverse Opposite:
A C G T A G T C A G C T A T G C G A C T A G C T G T C A A G T C G T A C G T A C
p-value:1e-10
log p-value:-2.355e+01
Information Content per bp:1.838
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.30%
Number of Background Sequences with motif111.1
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets45.2 +/- 21.1bp
Average Position of motif in Background51.0 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Spz1/MA0111.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GGGTAAGAGA
AGGGTAACAGC
 A C G T A C T G A C T G A C T G C A G T C T G A C T G A A T C G C T G A A C T G C G T A
C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGGTAAGAGA-
-TGGAACAGMA
 A C T G A C T G A C T G C A G T C T G A C T G A A T C G C T G A A C T G C G T A A C G T
A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGGTAAGAGA-
TGGGGAAGGGCM
 A C G T A C T G A C T G A C T G C A G T C T G A C T G A A T C G C T G A A C T G C G T A A C G T
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGGTAAGAGA
CAGGTAAGTAT
 A C G T A C T G A C T G A C T G C A G T C T G A C T G A A T C G C T G A A C T G C G T A
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGGTAAGAGA---
-GGTTAGAGACCT
 A C T G A C T G A C T G C A G T C T G A C T G A A T C G C T G A A C T G C G T A A C G T A C G T A C G T
A C G T C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GGGTAAGAGA---
-CGGAAGTGAAAC
 A C T G A C T G A C T G C A G T C T G A C T G A A T C G C T G A A C T G C G T A A C G T A C G T A C G T
A C G T T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGGTAAGAGA---
AGGTGNCAGACAG
 A C T G A C T G A C T G C A G T C T G A C T G A A T C G C T G A A C T G C G T A A C G T A C G T A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GGGTAAGAGA----
--GRAASTGAAAST
 A C T G A C T G A C T G C A G T C T G A C T G A A T C G C T G A A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGGTAAGAGA--
AGGTGHCAGACA
 A C T G A C T G A C T G C A G T C T G A C T G A A T C G C T G A A C T G C G T A A C G T A C G T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GGGTAAGAGA----
--GGAAGTGAAAST
 A C T G A C T G A C T G C A G T C T G A C T G A A T C G C T G A A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T