Information for 3-TTTTTTCACCCGC (Motif 5)

C A G T G A C T A C G T G A C T A C G T A C G T G T A C G T C A G T A C A G T C G T A C A T C G A G T C
Reverse Opposite:
C T A G A T G C A C T G A C T G A C T G A C G T A C T G C G T A C G T A C G T A C G T A C G T A G C T A
p-value:1e-11
log p-value:-2.708e+01
Information Content per bp:1.791
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.7 +/- 21.7bp
Average Position of motif in Background48.9 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTTTTTCACCCGC
TTTTTTTTCNNGTN-
 A C G T A C G T C A G T G A C T A C G T G A C T A C G T A C G T G T A C G T C A G T A C A G T C G T A C A T C G A G T C
G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTTTTTCACCCGC----
NNTTTTCACACCTTNNN
 C A G T G A C T A C G T G A C T A C G T A C G T G T A C G T C A G T A C A G T C G T A C A T C G A G T C A C G T A C G T A C G T A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

GCM2/MA0767.1/Jaspar

Match Rank:3
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:TTTTTTCACCCGC---
------TACCCGCATN
 C A G T G A C T A C G T G A C T A C G T A C G T G T A C G T C A G T A C A G T C G T A C A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A

PB0182.1_Srf_2/Jaspar

Match Rank:4
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------TTTTTTCACCCGC
NNNNTTTTTTTTTNAAC--
 A C G T A C G T A C G T A C G T A C G T A C G T C A G T G A C T A C G T G A C T A C G T A C G T G T A C G T C A G T A C A G T C G T A C A T C G A G T C
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TTTTTTCACCCGC-
-NTTTTCACACCTT
 C A G T G A C T A C G T G A C T A C G T A C G T G T A C G T C A G T A C A G T C G T A C A T C G A G T C A C G T
A C G T C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T

PB0197.1_Zfp105_2/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TTTTTTCACCCGC
NAAANTTATTGAANCAN
 A C G T A C G T A C G T A C G T C A G T G A C T A C G T G A C T A C G T A C G T G T A C G T C A G T A C A G T C G T A C A T C G A G T C
G A T C G T C A T C G A G T C A T C G A C G A T A G C T T C G A A C G T A C G T A C T G T C G A T G C A A G T C G T A C T C G A G A C T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TTTTTTCACCCGC
--HTTTCCCASG-
 C A G T G A C T A C G T G A C T A C G T A C G T G T A C G T C A G T A C A G T C G T A C A T C G A G T C
A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T

Foxj3/MA0851.1/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TTTTTTCACCCGC-
NNNTTTGTTTACNTTNN
 A C G T A C G T A C G T C A G T G A C T A C G T G A C T A C G T A C G T G T A C G T C A G T A C A G T C G T A C A T C G A G T C A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TTTTTTCACCCGC-
NNNTTTGTTTACNTTNN
 A C G T A C G T A C G T C A G T G A C T A C G T G A C T A C G T A C G T G T A C G T C A G T A C A G T C G T A C A T C G A G T C A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TTTTTTCACCCGC
ATTTTCCATT---
 C A G T G A C T A C G T G A C T A C G T A C G T G T A C G T C A G T A C A G T C G T A C A T C G A G T C
C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T A C G T A C G T