Information for 9-TTAACDTTTA (Motif 39)

G C A T C G A T G T C A C T G A G T A C C A T G A C G T C G A T A C G T G T C A
Reverse Opposite:
A C G T C G T A C G T A C G T A G T A C A C T G A G C T A C G T C G T A C G T A
p-value:1e-5
log p-value:-1.326e+01
Information Content per bp:1.769
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.87%
Number of Background Sequences with motif172.0
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets54.6 +/- 30.9bp
Average Position of motif in Background48.6 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BARHL2/MA0635.1/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:TTAACDTTTA--
--ANCGTTTANN
 G C A T C G A T G T C A C T G A G T A C C A T G A C G T C G A T A C G T G T C A A C G T A C G T
A C G T A C G T C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TTAACDTTTA---
TTAATGTTTAACC
 G C A T C G A T G T C A C T G A G T A C C A T G A C G T C G A T A C G T G T C A A C G T A C G T A C G T
A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TTAACDTTTA---
-TGACCTTTNCNT
 G C A T C G A T G T C A C T G A G T A C C A T G A C G T C G A T A C G T G T C A A C G T A C G T A C G T
A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

Nr2e1/MA0676.1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTAACDTTTA
TTGACTTTT-
 G C A T C G A T G T C A C T G A G T A C C A T G A C G T C G A T A C G T G T C A
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T

PB0109.1_Bbx_2/Jaspar

Match Rank:5
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------TTAACDTTTA
NNNNCTGTTAACNNTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C G A T G T C A C T G A G T A C C A T G A C G T C G A T A C G T G T C A
A G T C G A T C T G C A C G T A T A G C A G C T C A T G C A G T A G C T C T G A G T C A G A T C T C G A C T G A C G A T A G T C C T G A

Barhl1/MA0877.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TTAACDTTTA--
--NNCAATTANN
 G C A T C G A T G T C A C T G A G T A C C A T G A C G T C G A T A C G T G T C A A C G T A C G T
A C G T A C G T T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C

PB0046.1_Mybl1_1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTAACDTTTA----
NNANTAACGGTTNNNAN
 A C G T A C G T A C G T G C A T C G A T G T C A C T G A G T A C C A T G A C G T C G A T A C G T G T C A A C G T A C G T A C G T A C G T
G C T A C T G A C G T A C G A T G A C T C T G A T C G A A G T C A T C G C A T G G A C T G A C T C G A T G A C T G A T C G C T A C T G A

PH0085.1_Irx4/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TTAACDTTTA----
NNTTTTACATGTANNNT
 A C G T A C G T A C G T G C A T C G A T G T C A C T G A G T A C C A T G A C G T C G A T A C G T G T C A A C G T A C G T A C G T A C G T
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

Foxq1/MA0040.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TTAACDTTTA--
-TATTGTTTATT
 G C A T C G A T G T C A C T G A G T A C C A T G A C G T C G A T A C G T G T C A A C G T A C G T
A C G T G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T

HLTF/MA0109.1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TTAACDTTTA-
-AACCTTATAT
 G C A T C G A T G T C A C T G A G T A C C A T G A C G T C G A T A C G T G T C A A C G T
A C G T C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T