Information for 16-CTTCTGTAGGCTAGAT (Motif 33)

A T G C A C G T A C G T A G T C A C G T A C T G G A C T C T G A A C T G A C T G A G T C A C G T C G T A A C T G C G T A A C G T
Reverse Opposite:
C G T A C G A T A G T C A C G T C G T A A C T G A G T C A G T C A G C T C T G A G T A C C G T A A C T G C G T A G T C A A T C G
p-value:1e-7
log p-value:-1.743e+01
Information Content per bp:1.906
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.2 +/- 20.1bp
Average Position of motif in Background20.8 +/- 5.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.50
Offset:6
Orientation:forward strand
Alignment:CTTCTGTAGGCTAGAT
------TWGTCTGV--
 A T G C A C G T A C G T A G T C A C G T A C T G G A C T C T G A A C T G A C T G A G T C A C G T C G T A A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.49
Offset:6
Orientation:forward strand
Alignment:CTTCTGTAGGCTAGAT-
------AAGGCAAGTGT
 A T G C A C G T A C G T A G T C A C G T A C T G G A C T C T G A A C T G A C T G A G T C A C G T C G T A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.47
Offset:-1
Orientation:forward strand
Alignment:-CTTCTGTAGGCTAGAT
GCTTCC-----------
 A C G T A T G C A C G T A C G T A G T C A C G T A C T G G A C T C T G A A C T G A C T G A G T C A C G T C G T A A C T G C G T A A C G T
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:4
Score:0.46
Offset:7
Orientation:reverse strand
Alignment:CTTCTGTAGGCTAGAT-
-------TGTCTAGACG
 A T G C A C G T A C G T A G T C A C G T A C T G G A C T C T G A A C T G A C T G A G T C A C G T C G T A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

TATA-Box(TBP)/Promoter/Homer

Match Rank:5
Score:0.46
Offset:-1
Orientation:forward strand
Alignment:-CTTCTGTAGGCTAGAT
CCTTTTATAGNC-----
 A C G T A T G C A C G T A C G T A G T C A C G T A C T G G A C T C T G A A C T G A C T G A G T C A C G T C G T A A C T G C G T A A C G T
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C A C G T A C G T A C G T A C G T A C G T

Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer

Match Rank:6
Score:0.46
Offset:-1
Orientation:forward strand
Alignment:-CTTCTGTAGGCTAGAT---
VCAKCTGGNNNCCAGMTGBN
 A C G T A T G C A C G T A C G T A G T C A C G T A C T G G A C T C T G A A C T G A C T G A G T C A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T
T G A C G T A C C G T A A C T G T G A C C G A T A C T G A T C G A G C T T A C G T C G A T A G C G T A C C G T A A T C G T G A C G C A T A C T G A C T G A T G C

PH0040.1_Hmbox1/Jaspar

Match Rank:7
Score:0.45
Offset:5
Orientation:forward strand
Alignment:CTTCTGTAGGCTAGAT------
-----GAAAACTAGTTAACATC
 A T G C A C G T A C G T A G T C A C G T A C T G G A C T C T G A A C T G A C T G A G T C A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.45
Offset:8
Orientation:reverse strand
Alignment:CTTCTGTAGGCTAGAT
--------NGCTN---
 A T G C A C G T A C G T A G T C A C G T A C T G G A C T C T G A A C T G A C T G A G T C A C G T C G T A A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.44
Offset:1
Orientation:forward strand
Alignment:CTTCTGTAGGCTAGAT
-GTCTGTGGTTT----
 A T G C A C G T A C G T A G T C A C G T A C T G G A C T C T G A A C T G A C T G A G T C A C G T C G T A A C T G C G T A A C G T
A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:10
Score:0.43
Offset:-6
Orientation:reverse strand
Alignment:------CTTCTGTAGGCTAGAT
TAGCGCCCCCTGGTGGCCA---
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T A C G T A G T C A C G T A C T G G A C T C T G A A C T G A C T G A G T C A C G T C G T A A C T G C G T A A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T A C G T A C G T