Information for 8-ARCAGHCCACCAGGTG (Motif 18)

G T C A T C G A T A G C G C T A T A C G G T C A A G T C G T A C C G T A A T G C T G A C C T G A T C A G A C T G A G C T A C T G
Reverse Opposite:
G T A C C T G A A G T C A G T C A G C T A C T G A T C G G C A T A C T G A C T G C A G T A G T C C G A T A C T G A G C T A C G T
p-value:1e-10
log p-value:-2.367e+01
Information Content per bp:1.681
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.73%
Number of Background Sequences with motif55.8
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets38.0 +/- 21.4bp
Average Position of motif in Background42.7 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0139.1/Jaspar

Match Rank:1
Score:0.68
Offset:3
Orientation:forward strand
Alignment:ARCAGHCCACCAGGTG------
---TGGCCACCAGGGGGCGCTA
 G T C A T C G A T A G C G C T A T A C G G T C A A G T C G T A C C G T A A T G C T G A C C T G A T C A G A C T G A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:ARCAGHCCACCAGGTG-------
---TGGCCACCAGGTGGCACTNT
 G T C A T C G A T A G C G C T A T A C G G T C A A G T C G T A C C G T A A T G C T G A C C T G A T C A G A C T G A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:ARCAGHCCACCAGGTG---------
-----GCCASCAGGGGGCGCYVNNG
 G T C A T C G A T A G C G C T A T A C G G T C A A G T C G T A C C G T A A T G C T G A C C T G A T C A G A C T G A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.64
Offset:8
Orientation:reverse strand
Alignment:ARCAGHCCACCAGGTG--
--------NNCAGGTGNN
 G T C A T C G A T A G C G C T A T A C G G T C A A G T C G T A C C G T A A T G C T G A C C T G A T C A G A C T G A G C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

TCF4/MA0830.1/Jaspar

Match Rank:5
Score:0.64
Offset:8
Orientation:reverse strand
Alignment:ARCAGHCCACCAGGTG--
--------NNCAGGTGCG
 G T C A T C G A T A G C G C T A T A C G G T C A A G T C G T A C C G T A A T G C T G A C C T G A T C A G A C T G A G C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G

FIGLA/MA0820.1/Jaspar

Match Rank:6
Score:0.64
Offset:8
Orientation:reverse strand
Alignment:ARCAGHCCACCAGGTG--
--------AACAGGTGNT
 G T C A T C G A T A G C G C T A T A C G G T C A A G T C G T A C C G T A A T G C T G A C C T G A T C A G A C T G A G C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T

TCF3/MA0522.2/Jaspar

Match Rank:7
Score:0.64
Offset:8
Orientation:reverse strand
Alignment:ARCAGHCCACCAGGTG--
--------NNCAGGTGTN
 G T C A T C G A T A G C G C T A T A C G G T C A A G T C G T A C C G T A A T G C T G A C C T G A T C A G A C T G A G C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:8
Score:0.62
Offset:5
Orientation:forward strand
Alignment:ARCAGHCCACCAGGTG------
-----ATCCACAGGTGCGAAAA
 G T C A T C G A T A G C G C T A T A C G G T C A A G T C G T A C C G T A A T G C T G A C C T G A T C A G A C T G A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:ARCAGHCCACCAGGTG---
-------SDGCAGGTGCNS
 G T C A T C G A T A G C G C T A T A C G G T C A A G T C G T A C C G T A A T G C T G A C C T G A T C A G A C T G A G C T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

ID4/MA0824.1/Jaspar

Match Rank:10
Score:0.61
Offset:8
Orientation:reverse strand
Alignment:ARCAGHCCACCAGGTG--
--------GACAGGTGTN
 G T C A T C G A T A G C G C T A T A C G G T C A A G T C G T A C C G T A A T G C T G A C C T G A T C A G A C T G A G C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A