Information for 3-TTAHTCCCTCATCAGT (Motif 5)

A C G T A G C T C G T A G A T C C G A T A G T C A G T C G T A C A G C T A G T C G T C A A C G T A G T C C G T A C T A G A G C T
Reverse Opposite:
C T G A A G T C C G A T A C T G C G T A A C G T A C T G C T G A A C T G C T A G C T A G C G T A C A T G A C G T T C G A C G T A
p-value:1e-12
log p-value:-2.787e+01
Information Content per bp:1.760
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.4 +/- 17.8bp
Average Position of motif in Background35.4 +/- 10.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0125.1_Obox5_2/Jaspar

Match Rank:1
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TTAHTCCCTCATCAGT
GATAATTAATCCCTCTT----
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A G A T C C G A T A G T C A G T C G T A C A G C T A G T C G T C A A C G T A G T C C G T A C T A G A G C T
A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T A C G T A C G T A C G T A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TTAHTCCCTCATCAGT---
--NTNTTCTTATCAGTNTN
 A C G T A G C T C G T A G A T C C G A T A G T C A G T C G T A C A G C T A G T C G T C A A C G T A G T C C G T A C T A G A G C T A C G T A C G T A C G T
A C G T A C G T G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A

PH0124.1_Obox5_1/Jaspar

Match Rank:3
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TTAHTCCCTCATCAGT
NANANTTAATCCCNNNN----
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A G A T C C G A T A G T C A G T C G T A C A G C T A G T C G T C A A C G T A G T C C G T A C T A G A G C T
C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A A C G T A C G T A C G T A C G T

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TTAHTCCCTCATCAGT
CTTATCTCHMCATCT--
 A C G T A C G T A G C T C G T A G A T C C G A T A G T C A G T C G T A C A G C T A G T C G T C A A C G T A G T C C G T A C T A G A G C T
A T G C G A C T C G A T C G T A A C G T A G T C C G A T A G T C G A T C G T C A T A G C C G T A A C G T A G T C C G A T A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TTAHTCCCTCATCAGT-----
----TCACCCATCAATAAACA
 A C G T A G C T C G T A G A T C C G A T A G T C A G T C G T A C A G C T A G T C G T C A A C G T A G T C C G T A C T A G A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

PH0130.1_Otx2/Jaspar

Match Rank:6
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TTAHTCCCTCATCAGT
GANNATTAATCCCTNNN----
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A G A T C C G A T A G T C A G T C G T A C A G C T A G T C G T C A A C G T A G T C C G T A C T A G A G C T
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A A C G T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:7
Score:0.54
Offset:7
Orientation:forward strand
Alignment:TTAHTCCCTCATCAGT-
-------ACCATCTGTT
 A C G T A G C T C G T A G A T C C G A T A G T C A G T C G T A C A G C T A G T C G T C A A C G T A G T C C G T A C T A G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TTAHTCCCTCATCAGT
NNACTTCCTCTTNN--
 A C G T A G C T C G T A G A T C C G A T A G T C A G T C G T A C A G C T A G T C G T C A A C G T A G T C C G T A C T A G A G C T
C A G T G C T A C T G A A T G C C G A T C G A T A G T C A G T C A C G T A G T C G C A T G C A T G C T A T C G A A C G T A C G T

PH0138.1_Pitx2/Jaspar

Match Rank:9
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TTAHTCCCTCATCAGT
GNNNATTAATCCCTNCN----
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A G A T C C G A T A G T C A G T C G T A C A G C T A G T C G T C A A C G T A G T C C G T A C T A G A G C T
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A A C G T A C G T A C G T A C G T

PH0129.1_Otx1/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TTAHTCCCTCATCAGT
NNNAATTAATCCCCNCN----
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A G A T C C G A T A G T C A G T C G T A C A G C T A G T C G T C A A C G T A G T C C G T A C T A G A G C T
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T A C G T A C G T A C G T A C G T