Information for 2-GTCTTGTDVCTGTGTT (Motif 4)

C A T G G C A T A G T C G A C T A C G T A T C G A C G T C A T G T A C G T A G C A C G T A C T G A C G T A C T G A G C T A C G T
Reverse Opposite:
G T C A C T G A T G A C G T C A A G T C C G T A A T C G A G T C G A T C G T C A A T G C C G T A C G T A C T A G C G T A G A T C
p-value:1e-13
log p-value:-3.013e+01
Information Content per bp:1.759
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.5 +/- 20.6bp
Average Position of motif in Background44.1 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.50
Offset:8
Orientation:forward strand
Alignment:GTCTTGTDVCTGTGTT
--------GCTGTG--
 C A T G G C A T A G T C G A C T A C G T A T C G A C G T C A T G T A C G T A G C A C G T A C T G A C G T A C T G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:2
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GTCTTGTDVCTGTGTT
CCATTGTTNY------
 C A T G G C A T A G T C G A C T A C G T A T C G A C G T C A T G T A C G T A G C A C G T A C T G A C G T A C T G A G C T A C G T
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:3
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--GTCTTGTDVCTGTGTT
NNNTGTTGTTGTTNG---
 A C G T A C G T C A T G G C A T A G T C G A C T A C G T A T C G A C G T C A T G T A C G T A G C A C G T A C T G A C G T A C T G A G C T A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:4
Score:0.49
Offset:2
Orientation:forward strand
Alignment:GTCTTGTDVCTGTGTT
--ATTGTT--------
 C A T G G C A T A G T C G A C T A C G T A T C G A C G T C A T G T A C G T A G C A C G T A C T G A C G T A C T G A G C T A C G T
A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.48
Offset:5
Orientation:reverse strand
Alignment:GTCTTGTDVCTGTGTT-----
-----NNGCGTGTGTGCNGCN
 C A T G G C A T A G T C G A C T A C G T A T C G A C G T C A T G T A C G T A G C A C G T A C T G A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

CDX2/MA0465.1/Jaspar

Match Rank:6
Score:0.47
Offset:1
Orientation:reverse strand
Alignment:GTCTTGTDVCTGTGTT
-TTTTATGGCTN----
 C A T G G C A T A G T C G A C T A C G T A T C G A C G T C A T G T A C G T A G C A C G T A C T G A C G T A C T G A G C T A C G T
A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.47
Offset:3
Orientation:reverse strand
Alignment:GTCTTGTDVCTGTGTT
---CTGTTCCTGG---
 C A T G G C A T A G T C G A C T A C G T A T C G A C G T C A T G T A C G T A G C A C G T A C T G A C G T A C T G A G C T A C G T
A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:8
Score:0.47
Offset:1
Orientation:forward strand
Alignment:GTCTTGTDVCTGTGTT
-CTTTGT---------
 C A T G G C A T A G T C G A C T A C G T A T C G A C G T C A T G T A C G T A G C A C G T A C T G A C G T A C T G A G C T A C G T
A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:9
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:GTCTTGTDVCTGTGTT
NTTTTATGAC------
 C A T G G C A T A G T C G A C T A C G T A T C G A C G T C A T G T A C G T A G C A C G T A C T G A C G T A C T G A G C T A C G T
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.46
Offset:0
Orientation:forward strand
Alignment:GTCTTGTDVCTGTGTT
CCWTTGTYYB------
 C A T G G C A T A G T C G A C T A C G T A T C G A C G T C A T G T A C G T A G C A C G T A C T G A C G T A C T G A G C T A C G T
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T