Information for 22-ATTAATTCATTCA (Motif 35)

C G T A A C G T A C G T C G T A C G T A A C G T A C G T G T A C C G T A A C G T A C G T A T G C G T C A
Reverse Opposite:
A C G T A T C G G T C A T C G A A C G T A C T G C G T A C G T A C G A T A C G T C G T A C G T A A C G T
p-value:1e-4
log p-value:-9.923e+00
Information Content per bp:1.846
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.2 +/- 14.2bp
Average Position of motif in Background49.4 +/- 21.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0093.1_Lhx3/Jaspar

Match Rank:1
Score:0.82
Offset:-3
Orientation:forward strand
Alignment:---ATTAATTCATTCA-
GAAATTAATTAAATAAT
 A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A A C G T A C G T G T A C C G T A A C G T A C G T A T G C G T C A A C G T
T A C G C G A T G T C A T C G A G A C T G A C T C T G A C G T A C G A T A G C T C T G A C T G A C G T A C G A T G T C A G T C A A C G T

PH0146.1_Pou3f1/Jaspar

Match Rank:2
Score:0.82
Offset:-5
Orientation:forward strand
Alignment:-----ATTAATTCATTCA
AATTAATTAATTAATTC-
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A A C G T A C G T G T A C C G T A A C G T A C G T A T G C G T C A
C T G A T G C A A G C T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G T C A T C G A A C G T C G A T G T A C A C G T

PH0149.1_Pou3f4/Jaspar

Match Rank:3
Score:0.81
Offset:-5
Orientation:forward strand
Alignment:-----ATTAATTCATTCA
AATTAATTAATTAATTC-
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A A C G T A C G T G T A C C G T A A C G T A C G T A T G C G T C A
C T G A T G C A G C A T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G C T A C T G A C A G T C G A T A G T C A C G T

PH0095.1_Lhx5/Jaspar

Match Rank:4
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---ATTAATTCATTCA-
CGAATTAATTAAATACT
 A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A A C G T A C G T G T A C C G T A A C G T A C G T A T G C G T C A A C G T
T A G C C T A G G C T A C T G A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C T A G C A T G T C A G T A C A G C T

PH0011.1_Alx1_2/Jaspar

Match Rank:5
Score:0.80
Offset:-4
Orientation:reverse strand
Alignment:----ATTAATTCATTCA
NNNAATTAATTAANGNG
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A A C G T A C G T G T A C C G T A A C G T A C G T A T G C G T C A
A C T G G A T C G A T C T C G A T C G A G A C T G A C T C T G A C G T A G A C T A G C T C T G A C T G A G A C T C A T G A G T C T C A G

Arx/MA0874.1/Jaspar

Match Rank:6
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---ATTAATTCATTCA-
TNCATTAATTAATGNAC
 A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A A C G T A C G T G T A C C G T A A C G T A C G T A T G C G T C A A C G T
C G A T T A G C G T A C C G T A A G C T G A C T C G T A C G T A G A C T C G A T C T G A C T G A G A C T A C T G T A C G T G C A A G T C

PH0003.1_Arx/Jaspar

Match Rank:7
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---ATTAATTCATTCA-
TNCATTAATTAATGNAC
 A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A A C G T A C G T G T A C C G T A A C G T A C G T A T G C G T C A A C G T
C G A T T A G C G T A C C G T A A G C T G A C T C G T A C G T A G A C T C G A T C T G A C T G A G A C T A C T G T A C G T G C A A G T C

PH0136.1_Phox2b/Jaspar

Match Rank:8
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---ATTAATTCATTCA-
CNNNTTAATTAATTNNN
 A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A A C G T A C G T G T A C C G T A A C G T A C G T A T G C G T C A A C G T
A T G C T A G C G A C T T C G A G A C T G A C T T C G A C G T A G A C T A G C T C T G A C T G A A C G T C A G T T G A C A G T C A T C G

PH0173.1_Uncx/Jaspar

Match Rank:9
Score:0.80
Offset:-4
Orientation:forward strand
Alignment:----ATTAATTCATTCA
CATAATTAATTAACGCG
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A A C G T A C G T G T A C C G T A A C G T A C G T A T G C G T C A
T G A C C T G A G C A T C T G A T G C A A G C T G A C T T C G A C G T A G A C T A C G T C T G A C T G A A G T C T A C G T A G C A C T G

PH0153.1_Prop1/Jaspar

Match Rank:10
Score:0.80
Offset:-4
Orientation:reverse strand
Alignment:----ATTAATTCATTCA
GNNTNTTAATTAATNCN
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A A C G T A C G T G T A C C G T A A C G T A C G T A T G C G T C A
C T A G G A C T G C A T G C A T G T A C G A C T G A C T C G T A C G T A G A C T A C G T C T G A C T G A A G C T A C G T A G T C A C T G