Information for 2-ATCAAAATGGAGT (Motif 3)

G C T A G C A T A G T C C G T A C G T A G T C A C G T A A C G T A C T G A C T G C G T A C T A G C G A T
Reverse Opposite:
G C T A A G T C C G A T G T A C A G T C C G T A A C G T A C G T A C G T A C G T A C T G C G T A C A G T
p-value:1e-13
log p-value:-3.074e+01
Information Content per bp:1.804
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.86%
Number of Background Sequences with motif14.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets43.4 +/- 26.0bp
Average Position of motif in Background57.0 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.75
Offset:2
Orientation:forward strand
Alignment:ATCAAAATGGAGT-
--CAAGATGGCGGC
 G C T A G C A T A G T C C G T A C G T A G T C A C G T A A C G T A C T G A C T G C G T A C T A G C G A T A C G T
A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:ATCAAAATGGAGT-
--CAAGATGGCGGC
 G C T A G C A T A G T C C G T A C G T A G T C A C G T A A C G T A C T G A C T G C G T A C T A G C G A T A C G T
A C G T A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

PB0132.1_Hbp1_2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ATCAAAATGGAGT--
NNTNNACAATGGGANNN
 A C G T A C G T G C T A G C A T A G T C C G T A C G T A G T C A C G T A A C G T A C T G A C T G C G T A C T A G C G A T A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

YY2/MA0748.1/Jaspar

Match Rank:4
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:ATCAAAATGGAGT--
----TAATGGCGGNC
 G C T A G C A T A G T C C G T A C G T A G T C A C G T A A C G T A C T G A C T G C G T A C T A G C G A T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

PB0176.1_Sox5_2/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ATCAAAATGGAGT-
TATCATAATTAAGGA
 A C G T G C T A G C A T A G T C C G T A C G T A G T C A C G T A A C G T A C T G A C T G C G T A C T A G C G A T A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ATCAAAATGGAGT
CCAAAAATAG---
 G C T A G C A T A G T C C G T A C G T A G T C A C G T A A C G T A C T G A C T G C G T A C T A G C G A T
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ATCAAAATGGAGT
CTCACACAATGGCGC
 A C G T A C G T G C T A G C A T A G T C C G T A C G T A G T C A C G T A A C G T A C T G A C T G C G T A C T A G C G A T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

Sox2/MA0143.3/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ATCAAAATGGAGT
--AACAAAGG---
 G C T A G C A T A G T C C G T A C G T A G T C A C G T A A C G T A C T G A C T G C G T A C T A G C G A T
A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----ATCAAAATGGAGT
ARGAGGMCAAAATGW---
 A C G T A C G T A C G T A C G T A C G T G C T A G C A T A G T C C G T A C G T A G T C A C G T A A C G T A C T G A C T G C G T A C T A G C G A T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ATCAAAATGGAGT
--RACAAWGG---
 G C T A G C A T A G T C C G T A C G T A G T C A C G T A A C G T A C T G A C T G C G T A C T A G C G A T
A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T