Information for 16-GCTAHGCTTTTATGAG (Motif 23)

A C T G A G T C A C G T C G T A G A C T A T C G G T A C A G C T C G A T A C G T A C G T C T G A A C G T A C T G C G T A C T A G
Reverse Opposite:
A G T C A C G T A G T C C G T A A G C T C G T A C G T A C G T A C T G A A C T G A T G C C A G T A C G T C G T A A C T G A G T C
p-value:1e-8
log p-value:-1.888e+01
Information Content per bp:1.837
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.5 +/- 20.2bp
Average Position of motif in Background25.1 +/- 4.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0068.1_Hoxc13/Jaspar

Match Rank:1
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GCTAHGCTTTTATGAG----
----NAATTTTACGAGNTNN
 A C T G A G T C A C G T C G T A G A C T A T C G G T A C A G C T C G A T A C G T A C G T C T G A A C G T A C T G C G T A C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:2
Score:0.60
Offset:7
Orientation:forward strand
Alignment:GCTAHGCTTTTATGAG-
-------TTTTATKRGG
 A C T G A G T C A C G T C G T A G A C T A T C G G T A C A G C T C G A T A C G T A C G T C T G A A C G T A C T G C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

PH0048.1_Hoxa13/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GCTAHGCTTTTATGAG----
----ANATTTTACGAGNNNN
 A C T G A G T C A C G T C G T A G A C T A T C G G T A C A G C T C G A T A C G T A C G T C T G A A C G T A C T G C G T A C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:GCTAHGCTTTTATGAG-
-------TTTTATTRGN
 A C T G A G T C A C G T C G T A G A C T A T C G G T A C A G C T C G A T A C G T A C G T C T G A A C G T A C T G C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

HOXC13/MA0907.1/Jaspar

Match Rank:5
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:GCTAHGCTTTTATGAG-
------NTTTTACGAGN
 A C T G A G T C A C G T C G T A G A C T A T C G G T A C A G C T C G A T A C G T A C G T C T G A A C G T A C T G C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

HOXC10/MA0905.1/Jaspar

Match Rank:6
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GCTAHGCTTTTATGAG
------NTTTTACGAC
 A C T G A G T C A C G T C G T A G A C T A T C G G T A C A G C T C G A T A C G T A C G T C T G A A C G T A C T G C G T A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:7
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:GCTAHGCTTTTATGAG
------NTTTTATGAC
 A C T G A G T C A C G T C G T A G A C T A T C G G T A C A G C T C G A T A C G T A C G T C T G A A C G T A C T G C G T A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C

HOXD13/MA0909.1/Jaspar

Match Rank:8
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:GCTAHGCTTTTATGAG
------NTTTTATTGG
 A C T G A G T C A C G T C G T A G A C T A T C G G T A C A G C T C G A T A C G T A C G T C T G A A C G T A C T G C G T A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

CDX1/MA0878.1/Jaspar

Match Rank:9
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:GCTAHGCTTTTATGAG
-------TTTTATTGC
 A C T G A G T C A C G T C G T A G A C T A T C G G T A C A G C T C G A T A C G T A C G T C T G A A C G T A C T G C G T A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C

CDX2/MA0465.1/Jaspar

Match Rank:10
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:GCTAHGCTTTTATGAG--
-------TTTTATGGCTN
 A C T G A G T C A C G T C G T A G A C T A T C G G T A C A G C T C G A T A C G T A C G T C T G A A C G T A C T G C G T A C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T