Information for 3-TMGASAMTAGRGT (Motif 10)

C A G T T G C A A C T G C G T A A T C G C G T A G T C A A C G T C G T A A C T G C T A G A C T G A C G T
Reverse Opposite:
C G T A G T A C A G T C A G T C A C G T G T C A A C G T A C G T A T G C A C G T A G T C A C G T G T C A
p-value:1e-10
log p-value:-2.441e+01
Information Content per bp:1.853
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.4 +/- 28.0bp
Average Position of motif in Background81.7 +/- 11.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0132.1_Hbp1_2/Jaspar

Match Rank:1
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TMGASAMTAGRGT--
NNTNNACAATGGGANNN
 A C G T A C G T C A G T T G C A A C T G C G T A A T C G C G T A G T C A A C G T C G T A A C T G C T A G A C T G A C G T A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

PB0168.1_Sox14_2/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TMGASAMTAGRGT
CTCACACAATGGCGC
 A C G T A C G T C A G T T G C A A C T G C G T A A T C G C G T A G T C A A C G T C G T A A C T G C T A G A C T G A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

Sox17/MA0078.1/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TMGASAMTAGRGT
--GACAATGNN--
 C A G T T G C A A C T G C G T A A T C G C G T A G T C A A C G T C G T A A C T G C T A G A C T G A C G T
A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:4
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----TMGASAMTAGRGT
TTGACCGAGAATTCC--
 A C G T A C G T A C G T A C G T C A G T T G C A A C T G C G T A A T C G C G T A G T C A A C G T C G T A A C T G C T A G A C T G A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C A C G T A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TMGASAMTAGRGT-
TAGTGAACAATAGATTT
 A C G T A C G T A C G T C A G T T G C A A C T G C G T A A T C G C G T A G T C A A C G T C G T A A C T G C T A G A C T G A C G T A C G T
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TMGASAMTAGRGT
-RAACAATGGN--
 C A G T T G C A A C T G C G T A A T C G C G T A G T C A A C G T C G T A A C T G C T A G A C T G A C G T
A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:7
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----TMGASAMTAGRGT
NNNNNGAACAATTGANN
 A C G T A C G T A C G T A C G T C A G T T G C A A C T G C G T A A T C G C G T A G T C A A C G T C G T A A C T G C T A G A C T G A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----TMGASAMTAGRGT
GNNACCGAGAATNNN--
 A C G T A C G T A C G T A C G T C A G T T G C A A C T G C G T A A T C G C G T A G T C A A C G T C G T A A C T G C T A G A C T G A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T A C G T A C G T

PB0073.1_Sox7_1/Jaspar

Match Rank:9
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----TMGASAMTAGRGT----
AATAAAGAACAATAGAATTTCA
 A C G T A C G T A C G T A C G T A C G T C A G T T G C A A C T G C G T A A T C G C G T A G T C A A C G T C G T A A C T G C T A G A C T G A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TMGASAMTAGRGT
-AGAAACGAAAGT
 C A G T T G C A A C T G C G T A A T C G C G T A G T C A A C G T C G T A A C T G C T A G A C T G A C G T
A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T