Information for 15-AGGCTTTGTGAAAAAT (Motif 35)

C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C T G A C G T C T A G C G T A C T G A C G T A C T G A C T G A A C G T
Reverse Opposite:
C G T A A G C T A G C T A C G T A G C T A C G T A G T C C G T A A G T C C G T A G T C A C G T A A C T G A G T C A G T C A C G T
p-value:1e-10
log p-value:-2.441e+01
Information Content per bp:1.917
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.2 +/- 25.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGGCTTTGTGAAAAAT
---CTTTGT-------
 C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C T G A C G T C T A G C G T A C T G A C G T A C T G A C T G A A C G T
A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:2
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AGGCTTTGTGAAAAAT
AGGVNCCTTTGT-------
 A C G T A C G T A C G T C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C T G A C G T C T A G C G T A C T G A C G T A C T G A C T G A A C G T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGGCTTTGTGAAAAAT
--CCWTTGTYYB----
 C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C T G A C G T C T A G C G T A C T G A C G T A C T G A C T G A A C G T
A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:4
Score:0.51
Offset:2
Orientation:forward strand
Alignment:AGGCTTTGTGAAAAAT
--CCWTTGTY------
 C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C T G A C G T C T A G C G T A C T G A C G T A C T G A C T G A A C G T
A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:AGGCTTTGTGAAAAAT
----CSTGGGAAAD--
 C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C T G A C G T C T A G C G T A C T G A C G T A C T G A C T G A A C G T
A C G T A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:6
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-AGGCTTTGTGAAAAAT
GAAAAGGTGTGAAAATT
 A C G T C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C T G A C G T C T A G C G T A C T G A C G T A C T G A C T G A A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

NFAT5/MA0606.1/Jaspar

Match Rank:7
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:AGGCTTTGTGAAAAAT
------NATGGAAAAN
 C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C T G A C G T C T A G C G T A C T G A C G T A C T G A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.49
Offset:0
Orientation:forward strand
Alignment:AGGCTTTGTGAAAAAT
AGGCCTNG--------
 C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C T G A C G T C T A G C G T A C T G A C G T A C T G A C T G A A C G T
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.49
Offset:2
Orientation:forward strand
Alignment:AGGCTTTGTGAAAAAT
--CCTTTGTT------
 C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C T G A C G T C T A G C G T A C T G A C G T A C T G A C T G A A C G T
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:10
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-AGGCTTTGTGAAAAAT
BAGTCATANTGAAAG--
 A C G T C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C T G A C G T C T A G C G T A C T G A C G T A C T G A C T G A A C G T
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G A C G T A C G T