Information for 7-CACGTGGYGC (Motif 17)

A T G C G C T A T G A C C A T G G A C T T A C G C T A G G A T C T A C G A T G C
Reverse Opposite:
T A C G A T G C C T A G G A T C A T G C C T G A G T A C A C T G C G A T T A C G
p-value:1e-12
log p-value:-2.953e+01
Information Content per bp:1.575
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif3.49%
Number of Background Sequences with motif300.7
Percentage of Background Sequences with motif0.66%
Average Position of motif in Targets47.6 +/- 27.5bp
Average Position of motif in Background49.9 +/- 36.7bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mycn/MA0104.3/Jaspar

Match Rank:1
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:CACGTGGYGC
CACGTGGC--
 A T G C G C T A T G A C C A T G G A C T T A C G C T A G G A T C T A C G A T G C
A G T C C G T A A G T C A C T G A C G T A C T G A T C G G A T C A C G T A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-CACGTGGYGC
TCACGTGACC-
 A C G T A T G C G C T A T G A C C A T G G A C T T A C G C T A G G A T C T A C G A T G C
A G C T A G T C G T C A A G T C C T A G A C G T A T C G T C G A A G T C A T G C A C G T

Creb3l2/MA0608.1/Jaspar

Match Rank:3
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-CACGTGGYGC
ACACGTGGC--
 A C G T A T G C G C T A T G A C C A T G G A C T T A C G C T A G G A T C T A C G A T G C
G C T A A T G C C G T A A G T C A C T G A C G T A T C G C A T G G T A C A C G T A C G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:CACGTGGYGC
CACGTGGN--
 A T G C G C T A T G A C C A T G G A C T T A C G C T A G G A T C T A C G A T G C
G T A C C T G A A G T C C T A G G A C T A C T G A T C G A G C T A C G T A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:CACGTGGYGC
CACGTGDC--
 A T G C G C T A T G A C C A T G G A C T T A C G C T A G G A T C T A C G A T G C
G A T C C T G A A G T C C T A G G C A T C T A G C G T A G A T C A C G T A C G T

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-CACGTGGYGC
CCACGTGGNN-
 A C G T A T G C G C T A T G A C C A T G G A C T T A C G C T A G G A T C T A C G A T G C
T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A G C T A T G C A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:CACGTGGYGC
CACGTGNC--
 A T G C G C T A T G A C C A T G G A C T T A C G C T A G G A T C T A C G A T G C
G T A C C T G A A G T C C T A G G C A T A C T G G T C A G A T C A C G T A C G T

Id2/MA0617.1/Jaspar

Match Rank:8
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-CACGTGGYGC
GCACGTGA---
 A C G T A T G C G C T A T G A C C A T G G A C T T A C G C T A G G A T C T A C G A T G C
T C A G A G T C C G T A A G T C A C T G A C G T A C T G C T G A A C G T A C G T A C G T

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-CACGTGGYGC
CCACGTGGNN-
 A C G T A T G C G C T A T G A C C A T G G A C T T A C G C T A G G A T C T A C G A T G C
T A G C A G T C C G T A A G T C C T A G A G C T A C T G A T C G A G T C A G T C A C G T

MAX/MA0058.3/Jaspar

Match Rank:10
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--CACGTGGYGC
NNCACGTGGT--
 A C G T A C G T A T G C G C T A T G A C C A T G G A C T T A C G C T A G G A T C T A C G A T G C
C T G A T A C G T G A C C T G A A G T C T C A G G A C T A C T G A C T G A C G T A C G T A C G T