Information for 5-GTGTGCGAGA (Motif 13)

A T C G C G A T A T C G A G C T A C T G A G T C C T A G T G C A C T A G G C T A
Reverse Opposite:
C G A T A G T C A C G T A G T C T C A G A G T C T C G A A T G C C G T A A T G C
p-value:1e-9
log p-value:-2.185e+01
Information Content per bp:1.834
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.13%
Number of Background Sequences with motif156.8
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets49.1 +/- 26.6bp
Average Position of motif in Background51.9 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------GTGTGCGAGA
NNNNTTGTGTGCTTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G A T A T C G A G C T A C T G A G T C C T A G T G C A C T A G G C T A
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------GTGTGCGAGA
NNGCGTGTGTGCNGCN
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G A T A T C G A G C T A C T G A G T C C T A G T G C A C T A G G C T A
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTGTGCGAGA
TGCGTGGGYG-
 A C G T A T C G C G A T A T C G A G C T A C T G A G T C C T A G T G C A C T A G G C T A
C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GTGTGCGAGA--
AGGTGHCAGACA
 A T C G C G A T A T C G A G C T A C T G A G T C C T A G T G C A C T A G G C T A A C G T A C G T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

PB0044.1_Mtf1_1/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GTGTGCGAGA-
GGGCCGTGTGCAAAAA
 A C G T A C G T A C G T A C G T A C G T A T C G C G A T A T C G A G C T A C T G A G T C C T A G T G C A C T A G G C T A A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

PB0138.1_Irf4_2/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTGTGCGAGA-----
GNNACCGAGAATNNN
 A T C G C G A T A T C G A G C T A C T G A G T C C T A G T G C A C T A G G C T A A C G T A C G T A C G T A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTGTGCGAGA---
AGGTGNCAGACAG
 A T C G C G A T A T C G A G C T A C T G A G T C C T A G T G C A C T A G G C T A A C G T A C G T A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GTGTGCGAGA
NGCGTGGGCGGR-
 A C G T A C G T A C G T A T C G C G A T A T C G A G C T A C T G A G T C C T A G T G C A C T A G G C T A
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTGTGCGAGA--
BTKGGCGGGAAA
 A T C G C G A T A T C G A G C T A C T G A G T C C T A G T G C A C T A G G C T A A C G T A C G T
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

PB0139.1_Irf5_2/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GTGTGCGAGA-----
TTGACCGAGAATTCC
 A T C G C G A T A T C G A G C T A C T G A G T C C T A G T G C A C T A G G C T A A C G T A C G T A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C