Information for 9-SGGCGGCCATGMT (Motif 11)

A T G C A C T G A C T G A G T C A C T G A C T G A G T C A G T C C G T A A C G T A C T G G T A C A C G T
Reverse Opposite:
C G T A A C T G A G T C C G T A A C G T A C T G A C T G G T A C A G T C C T A G A G T C A G T C T A C G
p-value:1e-10
log p-value:-2.391e+01
Information Content per bp:1.917
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.0 +/- 23.1bp
Average Position of motif in Background29.2 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:SGGCGGCCATGMT-
--GCNGCCATCTTG
 A T G C A C T G A C T G A G T C A C T G A C T G A G T C A G T C C G T A A C G T A C T G G T A C A C G T A C G T
A C G T A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:SGGCGGCCATGMT-
--GCCGCCATCTTG
 A T G C A C T G A C T G A G T C A C T G A C T G A G T C A G T C C G T A A C G T A C T G G T A C A C G T A C G T
A C G T A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:SGGCGGCCATGMT
-GTCCGCCATTA-
 A T G C A C T G A C T G A G T C A C T G A C T G A G T C A G T C C G T A A C G T A C T G G T A C A C G T
A C G T C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T

GLI2/MA0734.1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:SGGCGGCCATGMT-
--GCGACCACACTG
 A T G C A C T G A C T G A G T C A C T G A C T G A G T C A G T C C G T A A C G T A C T G G T A C A C G T A C G T
A C G T A C G T C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

PB0110.1_Bcl6b_2/Jaspar

Match Rank:5
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------SGGCGGCCATGMT
NNTNAGGGGCGGNNNN---
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G A G T C A C T G A C T G A G T C A G T C C G T A A C G T A C T G G T A C A C G T
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:6
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--SGGCGGCCATGMT
BTKGGCGGGAAA---
 A C G T A C G T A T G C A C T G A C T G A G T C A C T G A C T G A G T C A G T C C G T A A C G T A C T G G T A C A C G T
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:7
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----SGGCGGCCATGMT
TTGGGGGCGCCCCTAG-
 A C G T A C G T A C G T A C G T A T G C A C T G A C T G A G T C A C T G A C T G A G T C A G T C C G T A A C G T A C T G G T A C A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:SGGCGGCCATGMT--
-NGTTGCCATGGCAA
 A T G C A C T G A C T G A G T C A C T G A C T G A G T C A G T C C G T A A C G T A C T G G T A C A C G T A C G T A C G T
A C G T A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

HIC2/MA0738.1/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:SGGCGGCCATGMT
-NGTGGGCAT---
 A T G C A C T G A C T G A G T C A C T G A C T G A G T C A G T C C G T A A C G T A C T G G T A C A C G T
A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-SGGCGGCCATGMT
CWGGCGGGAA----
 A C G T A T G C A C T G A C T G A G T C A C T G A C T G A G T C A G T C C G T A A C G T A C T G G T A C A C G T
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T