Information for 5-TCCCTGCCAG (Motif 16)

C A G T A G T C A T G C G T A C A G C T A T C G T A G C G T A C G T C A A T C G
Reverse Opposite:
A T G C A C G T A C T G A T C G T A G C C T G A C A T G A T C G C T A G G T C A
p-value:1e-8
log p-value:-2.000e+01
Information Content per bp:1.821
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif3.91%
Number of Background Sequences with motif563.2
Percentage of Background Sequences with motif1.16%
Average Position of motif in Targets49.1 +/- 28.0bp
Average Position of motif in Background47.9 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.69
Offset:3
Orientation:forward strand
Alignment:TCCCTGCCAG-
---TTGCCAAG
 C A G T A G T C A T G C G T A C A G C T A T C G T A G C G T A C G T C A A T C G A C G T
A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TCCCTGCCAG--
---CTGCCCGCA
 C A G T A G T C A T G C G T A C A G C T A T C G T A G C G T A C G T C A A T C G A C G T A C G T
A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TCCCTGCCAG-
--CGTGCCAAG
 C A G T A G T C A T G C G T A C A G C T A T C G T A G C G T A C G T C A A T C G A C G T
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TCCCTGCCAG--
--VBTGWCAGCB
 C A G T A G T C A T G C G T A C A G C T A T C G T A G C G T A C G T C A A T C G A C G T A C G T
A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TCCCTGCCAG
----TGCCAA
 C A G T A G T C A T G C G T A C A G C T A T C G T A G C G T A C G T C A A T C G
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TCCCTGCCAG---
---ATGCCAGACN
 C A G T A G T C A T G C G T A C A G C T A T C G T A G C G T A C G T C A A T C G A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

PB0195.1_Zbtb3_2/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TCCCTGCCAG---
CAATCACTGGCAGAAT
 A C G T A C G T A C G T C A G T A G T C A T G C G T A C A G C T A T C G T A G C G T A C G T C A A T C G A C G T A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TCCCTGCCAG----
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T C A G T A G T C A T G C G T A C A G C T A T C G T A G C G T A C G T C A A T C G A C G T A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TCCCTGCCAG--
---ATGCCAACC
 C A G T A G T C A T G C G T A C A G C T A T C G T A G C G T A C G T C A A T C G A C G T A C G T
A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

INSM1/MA0155.1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TCCCTGCCAG
CGCCCCCTGACA-
 A C G T A C G T A C G T C A G T A G T C A T G C G T A C A G C T A T C G T A G C G T A C G T C A A T C G
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T