Information for 9-GCGCGCCACCTTG (Motif 9)

A C T G A G T C A C T G A G T C A C T G A G T C A G T C G T C A A T G C A G T C G A C T G A C T A C T G
Reverse Opposite:
A G T C C T G A C G T A A C T G A T C G A C G T A C T G A C T G A G T C C T A G A G T C A C T G A G T C
p-value:1e-11
log p-value:-2.735e+01
Information Content per bp:1.935
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif16.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets53.3 +/- 25.4bp
Average Position of motif in Background50.4 +/- 45.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0008.1_E2F2_1/Jaspar

Match Rank:1
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------GCGCGCCACCTTG
ATAAAGGCGCGCGAT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G T C A C T G A G T C A G T C G T C A A T G C A G T C G A C T G A C T A C T G
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GCGCGCCACCTTG
AGCGCGCC------
 A C G T A C T G A G T C A C T G A G T C A C T G A G T C A G T C G T C A A T G C A G T C G A C T G A C T A C T G
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GCGCGCCACCTTG
ANCGCGCGCCCTTNN-
 A C G T A C G T A C G T A C T G A G T C A C T G A G T C A C T G A G T C A G T C G T C A A T G C A G T C G A C T G A C T A C T G
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCGCGCCACCTTG--
NNGGCGACACCTCNNN
 A C G T A C T G A G T C A C T G A G T C A C T G A G T C A G T C G T C A A T G C A G T C G A C T G A C T A C T G A C G T A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GCGCGCCACCTTG
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G T C A C T G A G T C A G T C G T C A A T G C A G T C G A C T G A C T A C T G
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

PB0095.1_Zfp161_1/Jaspar

Match Rank:6
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------GCGCGCCACCTTG
NCANGCGCGCGCGCCA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G T C A C T G A G T C A G T C G T C A A T G C A G T C G A C T G A C T A C T G
G C A T G A T C C T G A C T A G C T A G G A T C T C A G G A T C C T A G A G T C C T A G A G T C T A C G G A T C G A T C G T C A A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCGCGCCACCTTG--
GGTCCCGCCCCCTTCTC
 A C G T A C G T A C T G A G T C A C T G A G T C A C T G A G T C A G T C G T C A A T G C A G T C G A C T G A C T A C T G A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCGCGCCACCTTG----
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C T G A G T C A C T G A G T C A C T G A G T C A G T C G T C A A T G C A G T C G A C T G A C T A C T G A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

YY1(Zf)/Promoter/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCGCGCCACCTTG
-GCCGCCATCTTG
 A C T G A G T C A C T G A G T C A C T G A G T C A G T C G T C A A T G C A G T C G A C T G A C T A C T G
A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

YY1/MA0095.2/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCGCGCCACCTTG
-GCNGCCATCTTG
 A C T G A G T C A C T G A G T C A C T G A G T C A G T C G T C A A T G C A G T C G A C T G A C T A C T G
A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G