Information for 10-TMACCAATCA (Motif 19)

A C G T T G A C C G T A A G T C A G T C C G T A C G T A A C G T G T A C C G T A
Reverse Opposite:
A C G T A C T G G T C A A C G T A C G T A C T G A C T G A C G T A C T G T G C A
p-value:1e-7
log p-value:-1.786e+01
Information Content per bp:1.838
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif56.1
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets54.2 +/- 23.2bp
Average Position of motif in Background40.9 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYB/MA0502.1/Jaspar

Match Rank:1
Score:0.85
Offset:-4
Orientation:forward strand
Alignment:----TMACCAATCA-
AAATGGACCAATCAG
 A C G T A C G T A C G T A C G T A C G T T G A C C G T A A G T C A G T C C G T A C G T A A C G T G T A C C G T A A C G T
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

NFYA/MA0060.2/Jaspar

Match Rank:2
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-TMACCAATCA-------
TGGACCAATCAGCACTCT
 A C G T A C G T T G A C C G T A A G T C A G T C C G T A C G T A A C G T G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--TMACCAATCA
ACTAGCCAATCA
 A C G T A C G T A C G T T G A C C G T A A G T C A G T C C G T A C G T A A C G T G T A C C G T A
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

Dux/MA0611.1/Jaspar

Match Rank:4
Score:0.78
Offset:3
Orientation:forward strand
Alignment:TMACCAATCA-
---CCAATCAA
 A C G T T G A C C G T A A G T C A G T C C G T A C G T A A C G T G T A C C G T A A C G T
A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

PBX1/MA0070.1/Jaspar

Match Rank:5
Score:0.75
Offset:0
Orientation:forward strand
Alignment:TMACCAATCA--
CCATCAATCAAA
 A C G T T G A C C G T A A G T C A G T C C G T A C G T A A C G T G T A C C G T A A C G T A C G T
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

NFY(CCAAT)/Promoter/Homer

Match Rank:6
Score:0.75
Offset:1
Orientation:forward strand
Alignment:TMACCAATCA-
-AGCCAATCGG
 A C G T T G A C C G T A A G T C A G T C C G T A C G T A A C G T G T A C C G T A A C G T
A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

PH0005.1_Barhl1/Jaspar

Match Rank:7
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--TMACCAATCA----
AACAACCAATTAATTC
 A C G T A C G T A C G T T G A C C G T A A G T C A G T C C G T A C G T A A C G T G T A C C G T A A C G T A C G T A C G T A C G T
G T C A C T G A G T A C T C G A C T G A A T G C G A T C C T G A G C T A A C G T G A C T C G T A C T G A A C G T C G A T G A T C

PH0006.1_Barhl2/Jaspar

Match Rank:8
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TMACCAATCA----
AAAAACCAATTAAGAA
 A C G T A C G T A C G T T G A C C G T A A G T C A G T C C G T A C G T A A C G T G T A C C G T A A C G T A C G T A C G T A C G T
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

MSX2/MA0708.1/Jaspar

Match Rank:9
Score:0.70
Offset:3
Orientation:forward strand
Alignment:TMACCAATCA-
---CCAATTAA
 A C G T T G A C C G T A A G T C A G T C C G T A C G T A A C G T G T A C C G T A A C G T
A C G T A C G T A C G T T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:10
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TMACCAATCA
TCATCAATCA
 A C G T T G A C C G T A A G T C A G T C C G T A C G T A A C G T G T A C C G T A
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A