Information for 6-TTTCCCCTTCACW (Motif 7)

A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C G T A G C T A G T C C G T A A G T C C G A T
Reverse Opposite:
C G A T A C T G A C G T A C T G C T G A C G T A A C T G T A C G C T A G T C A G C G T A C G T A C G T A
p-value:1e-13
log p-value:-3.192e+01
Information Content per bp:1.857
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets30.9 +/- 22.1bp
Average Position of motif in Background52.2 +/- 6.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTTCCCCTTCACW-------
TTTMCGCTTSABTGAACACN
 A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C G T A G C T A G T C C G T A A G T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C A G T G A C T T G A C G A T C T C A G A T G C G C A T A G C T T A C G C T G A A T C G G A C T C T A G T G C A T C G A A G T C G C T A A T G C T C G A

IRF1/MA0050.2/Jaspar

Match Rank:2
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------TTTCCCCTTCACW--
TTTTACTTTCACTTTCACTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C G T A G C T A G T C C G T A A G T C C G A T A C G T A C G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTTCCCCTTCACW
ACTTTCACTTTC---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C G T A G C T A G T C C G T A A G T C C G A T
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TTTCCCCTTCACW
-TTCCTCT-----
 A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C G T A G C T A G T C C G T A A G T C C G A T
A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T A C G T A C G T A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TTTCCCCTTCACW
AGTTTCAGTTTC---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C G T A G C T A G T C C G T A A G T C C G A T
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTTCCCCTTCACW
TTCCCCCTAC---
 A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C G T A G C T A G T C C G T A A G T C C G A T
A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T A C G T A C G T

E2F7/MA0758.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTTCCCCTTCACW-
TTTTCCCGCCAAAA
 A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C G T A G C T A G T C C G T A A G T C C G A T A C G T
C G A T C G A T A G C T A G C T A T G C A T G C A G T C T C A G A G T C A T G C C G T A C G T A G C T A C G T A

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TTTCCCCTTCACW
AGTTTCAKTTTC---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C G T A G C T A G T C C G T A A G T C C G A T
C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:9
Score:0.56
Offset:5
Orientation:forward strand
Alignment:TTTCCCCTTCACW
-----GCTTCC--
 A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C G T A G C T A G T C C G T A A G T C C G A T
A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTTCCCCTTCACW
GTTTCACTTCCG-
 A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C G T A G C T A G T C C G T A A G T C C G A T
A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G A C G T