Information for 13-GCMCATAAWTTACAAC (Motif 14)

A T C G G A T C G T A C A G T C G C T A A C G T C G T A C G T A C G A T A C G T A C G T C G T A A T G C C G T A C G T A A G T C
Reverse Opposite:
C T A G C G A T A C G T T A C G C G A T C G T A G T C A C G T A A C G T A C G T C G T A C A G T A C T G C A T G C A T G A T G C
p-value:1e-11
log p-value:-2.753e+01
Information Content per bp:1.740
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif13.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets43.0 +/- 25.3bp
Average Position of motif in Background53.1 +/- 21.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0176.1_Sox5_2/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCMCATAAWTTACAAC
TATCATAATTAAGGA-
 A T C G G A T C G T A C A G T C G C T A A C G T C G T A C G T A C G A T A C G T A C G T C G T A A T G C C G T A C G T A A G T C
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A A C G T

PH0051.1_Hoxa4/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCMCATAAWTTACAAC-
CNAGTTAATTAATAANN
 A T C G G A T C G T A C A G T C G C T A A C G T C G T A C G T A C G A T A C G T A C G T C G T A A T G C C G T A C G T A A G T C A C G T
T G A C T C G A G T C A T C A G G C A T G A C T G T C A C G T A G A C T A C G T C T G A C G T A A G C T C T G A C T G A G A C T G A T C

PH0069.1_Hoxc4/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCMCATAAWTTACAAC-
CGAATTAATTAACAATA
 A T C G G A T C G T A C A G T C G C T A A C G T C G T A C G T A C G A T A C G T A C G T C G T A A T G C C G T A C G T A A G T C A C G T
T G A C T C A G G T C A C T G A G C A T G A C T G T C A C G T A C G A T A C G T C T G A C G T A A G T C G C T A T G C A G C A T G T C A

Hoxc9/MA0485.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCMCATAAWTTACAAC
GGCCATAAATCAC---
 A T C G G A T C G T A C A G T C G C T A A C G T C G T A C G T A C G A T A C G T A C G T C G T A A T G C C G T A C G T A A G T C
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C A C G T A C G T A C G T

PH0023.1_Dlx4/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCMCATAAWTTACAAC
GCGCTATAATTACCGAC
 A C G T A T C G G A T C G T A C A G T C G C T A A C G T C G T A C G T A C G A T A C G T A C G T C G T A A T G C C G T A C G T A A G T C
A C G T G T A C T C A G T G A C C A G T C T G A G A C T C G T A C G T A C G A T A C G T C T G A G T A C G T A C T A C G G C T A G T A C

PH0091.1_Lhx1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCMCATAAWTTACAAC-
CGAATTAATTAATAATG
 A T C G G A T C G T A C A G T C G C T A A C G T C G T A C G T A C G A T A C G T A C G T C G T A A T G C C G T A C G T A A G T C A C G T
T G A C T C A G C G T A C G T A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C A T G C T A G C T A G A C T A C T G

PH0077.1_Hoxd12/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GCMCATAAWTTACAAC----
---NNNATTTTACGACNNTN
 A T C G G A T C G T A C A G T C G C T A A C G T C G T A C G T A C G A T A C G T A C G T C G T A A T G C C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

Dlx1/MA0879.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GCMCATAAWTTACAAC
---NNTAATTANN---
 A T C G G A T C G T A C A G T C G C T A A C G T C G T A C G T A C G A T A C G T A C G T C G T A A T G C C G T A C G T A A G T C
A C G T A C G T A C G T T A C G T G C A C G A T T G C A G C T A C G A T A C G T C T G A A C T G A C T G A C G T A C G T A C G T

PH0176.1_Vsx1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCMCATAAWTTACAAC-
CGAGTTAATTAATAATT
 A T C G G A T C G T A C A G T C G C T A A C G T C G T A C G T A C G A T A C G T A C G T C G T A A T G C C G T A C G T A A G T C A C G T
G T A C T A C G G T C A C T A G G A C T G A C T G T C A C G T A G A C T A C G T C T G A C T G A G A C T C T G A T G C A G C A T A G C T

RAX/MA0718.1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GCMCATAAWTTACAAC
---NTTAATTGNN---
 A T C G G A T C G T A C A G T C G C T A A C G T C G T A C G T A C G A T A C G T A C G T C G T A A T G C C G T A C G T A A G T C
A C G T A C G T A C G T C T A G G A C T G C A T C G T A C G T A C A G T C G A T C T A G T C A G A G T C A C G T A C G T A C G T