Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer | 1e-88 | -2.043e+02 | 0.0000 | 158.0 | 21.38% | 1296.7 | 2.74% | motif file (matrix) |
svg |
2 |
| HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer | 1e-74 | -1.709e+02 | 0.0000 | 160.0 | 21.65% | 1696.0 | 3.58% | motif file (matrix) |
svg |
3 |
| Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer | 1e-72 | -1.660e+02 | 0.0000 | 206.0 | 27.88% | 3054.4 | 6.45% | motif file (matrix) |
svg |
4 |
| Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer | 1e-40 | -9.213e+01 | 0.0000 | 70.0 | 9.47% | 540.7 | 1.14% | motif file (matrix) |
svg |
5 |
| Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer | 1e-28 | -6.604e+01 | 0.0000 | 177.0 | 23.95% | 4605.7 | 9.73% | motif file (matrix) |
svg |
6 |
| Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer | 1e-27 | -6.328e+01 | 0.0000 | 58.0 | 7.85% | 579.7 | 1.22% | motif file (matrix) |
svg |
7 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-26 | -5.996e+01 | 0.0000 | 292.0 | 39.51% | 10431.2 | 22.04% | motif file (matrix) |
svg |
8 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-25 | -5.868e+01 | 0.0000 | 297.0 | 40.19% | 10777.2 | 22.77% | motif file (matrix) |
svg |
9 |
| Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer | 1e-25 | -5.758e+01 | 0.0000 | 56.0 | 7.58% | 602.1 | 1.27% | motif file (matrix) |
svg |
10 |
| HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer | 1e-24 | -5.747e+01 | 0.0000 | 40.0 | 5.41% | 272.1 | 0.57% | motif file (matrix) |
svg |
11 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-22 | -5.074e+01 | 0.0000 | 101.0 | 13.67% | 2126.9 | 4.49% | motif file (matrix) |
svg |
12 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-19 | -4.494e+01 | 0.0000 | 81.0 | 10.96% | 1581.3 | 3.34% | motif file (matrix) |
svg |
13 |
| PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer | 1e-19 | -4.445e+01 | 0.0000 | 29.0 | 3.92% | 180.5 | 0.38% | motif file (matrix) |
svg |
14 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-18 | -4.155e+01 | 0.0000 | 73.0 | 9.88% | 1397.2 | 2.95% | motif file (matrix) |
svg |
15 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-17 | -4.081e+01 | 0.0000 | 97.0 | 13.13% | 2298.0 | 4.86% | motif file (matrix) |
svg |
16 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-13 | -3.194e+01 | 0.0000 | 95.0 | 12.86% | 2566.0 | 5.42% | motif file (matrix) |
svg |
17 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-12 | -2.980e+01 | 0.0000 | 126.0 | 17.05% | 4047.2 | 8.55% | motif file (matrix) |
svg |
18 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-11 | -2.655e+01 | 0.0000 | 90.0 | 12.18% | 2603.7 | 5.50% | motif file (matrix) |
svg |
19 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-10 | -2.306e+01 | 0.0000 | 65.0 | 8.80% | 1710.1 | 3.61% | motif file (matrix) |
svg |
20 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-9 | -2.250e+01 | 0.0000 | 52.0 | 7.04% | 1220.0 | 2.58% | motif file (matrix) |
svg |
21 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-9 | -2.219e+01 | 0.0000 | 17.0 | 2.30% | 142.3 | 0.30% | motif file (matrix) |
svg |
22 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-9 | -2.215e+01 | 0.0000 | 57.0 | 7.71% | 1426.6 | 3.01% | motif file (matrix) |
svg |
23 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-9 | -2.132e+01 | 0.0000 | 57.0 | 7.71% | 1459.5 | 3.08% | motif file (matrix) |
svg |
24 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-8 | -2.062e+01 | 0.0000 | 39.0 | 5.28% | 804.2 | 1.70% | motif file (matrix) |
svg |
25 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-8 | -2.015e+01 | 0.0000 | 61.0 | 8.25% | 1673.7 | 3.54% | motif file (matrix) |
svg |
26 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-7 | -1.821e+01 | 0.0000 | 29.0 | 3.92% | 530.7 | 1.12% | motif file (matrix) |
svg |
27 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-7 | -1.745e+01 | 0.0000 | 26.0 | 3.52% | 452.3 | 0.96% | motif file (matrix) |
svg |
28 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-7 | -1.638e+01 | 0.0000 | 64.0 | 8.66% | 1994.7 | 4.22% | motif file (matrix) |
svg |
29 |
| GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer | 1e-6 | -1.466e+01 | 0.0000 | 16.0 | 2.17% | 213.1 | 0.45% | motif file (matrix) |
svg |
30 |
| MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer | 1e-5 | -1.300e+01 | 0.0000 | 54.0 | 7.31% | 1741.1 | 3.68% | motif file (matrix) |
svg |
31 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-5 | -1.293e+01 | 0.0000 | 53.0 | 7.17% | 1700.7 | 3.59% | motif file (matrix) |
svg |
32 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-4 | -1.122e+01 | 0.0002 | 12.0 | 1.62% | 162.4 | 0.34% | motif file (matrix) |
svg |
33 |
| Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer | 1e-4 | -1.023e+01 | 0.0004 | 21.0 | 2.84% | 482.4 | 1.02% | motif file (matrix) |
svg |
34 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-4 | -9.848e+00 | 0.0006 | 9.0 | 1.22% | 106.0 | 0.22% | motif file (matrix) |
svg |
35 |
| HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer | 1e-3 | -8.811e+00 | 0.0016 | 70.0 | 9.47% | 2847.7 | 6.02% | motif file (matrix) |
svg |
36 |
| Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer | 1e-3 | -8.717e+00 | 0.0017 | 18.0 | 2.44% | 422.4 | 0.89% | motif file (matrix) |
svg |
37 |
| Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer | 1e-3 | -8.481e+00 | 0.0020 | 46.0 | 6.22% | 1673.4 | 3.54% | motif file (matrix) |
svg |
38 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-3 | -8.379e+00 | 0.0022 | 9.0 | 1.22% | 128.2 | 0.27% | motif file (matrix) |
svg |
39 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-3 | -8.309e+00 | 0.0023 | 241.0 | 32.61% | 12664.9 | 26.76% | motif file (matrix) |
svg |
40 |
| X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-3 | -8.226e+00 | 0.0024 | 11.0 | 1.49% | 191.4 | 0.40% | motif file (matrix) |
svg |
41 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-3 | -7.579e+00 | 0.0045 | 8.0 | 1.08% | 114.5 | 0.24% | motif file (matrix) |
svg |
42 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-3 | -7.186e+00 | 0.0066 | 48.0 | 6.50% | 1880.1 | 3.97% | motif file (matrix) |
svg |
43 |
| Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer | 1e-3 | -7.167e+00 | 0.0066 | 27.0 | 3.65% | 871.4 | 1.84% | motif file (matrix) |
svg |
44 |
| KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer | 1e-3 | -7.084e+00 | 0.0069 | 18.0 | 2.44% | 486.0 | 1.03% | motif file (matrix) |
svg |
45 |
| KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer | 1e-2 | -6.621e+00 | 0.0108 | 36.0 | 4.87% | 1333.4 | 2.82% | motif file (matrix) |
svg |
46 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-2 | -6.492e+00 | 0.0120 | 42.0 | 5.68% | 1641.1 | 3.47% | motif file (matrix) |
svg |
47 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -6.417e+00 | 0.0127 | 55.0 | 7.44% | 2316.3 | 4.89% | motif file (matrix) |
svg |
48 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -6.250e+00 | 0.0146 | 80.0 | 10.83% | 3681.8 | 7.78% | motif file (matrix) |
svg |
49 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-2 | -6.185e+00 | 0.0153 | 14.0 | 1.89% | 362.6 | 0.77% | motif file (matrix) |
svg |
50 |
| ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer | 1e-2 | -6.163e+00 | 0.0153 | 38.0 | 5.14% | 1470.1 | 3.11% | motif file (matrix) |
svg |
51 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -6.060e+00 | 0.0167 | 25.0 | 3.38% | 849.8 | 1.80% | motif file (matrix) |
svg |
52 |
| ETS(ETS)/Promoter/Homer | 1e-2 | -5.908e+00 | 0.0190 | 17.0 | 2.30% | 499.9 | 1.06% | motif file (matrix) |
svg |
53 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-2 | -5.791e+00 | 0.0210 | 42.0 | 5.68% | 1707.5 | 3.61% | motif file (matrix) |
svg |
54 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-2 | -5.700e+00 | 0.0225 | 60.0 | 8.12% | 2665.9 | 5.63% | motif file (matrix) |
svg |
55 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.616e+00 | 0.0241 | 28.0 | 3.79% | 1023.3 | 2.16% | motif file (matrix) |
svg |
56 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-2 | -5.542e+00 | 0.0255 | 32.0 | 4.33% | 1225.2 | 2.59% | motif file (matrix) |
svg |
57 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-2 | -5.511e+00 | 0.0258 | 60.0 | 8.12% | 2689.6 | 5.68% | motif file (matrix) |
svg |
58 |
| BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer | 1e-2 | -5.467e+00 | 0.0265 | 81.0 | 10.96% | 3851.7 | 8.14% | motif file (matrix) |
svg |
59 |
| Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-2 | -5.362e+00 | 0.0290 | 149.0 | 20.16% | 7793.5 | 16.47% | motif file (matrix) |
svg |
60 |
| Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer | 1e-2 | -5.358e+00 | 0.0290 | 14.0 | 1.89% | 398.0 | 0.84% | motif file (matrix) |
svg |
61 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-2 | -5.328e+00 | 0.0290 | 39.0 | 5.28% | 1599.9 | 3.38% | motif file (matrix) |
svg |
62 |
| AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer | 1e-2 | -5.276e+00 | 0.0300 | 82.0 | 11.10% | 3937.2 | 8.32% | motif file (matrix) |
svg |
63 |
| Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer | 1e-2 | -5.245e+00 | 0.0305 | 73.0 | 9.88% | 3439.3 | 7.27% | motif file (matrix) |
svg |
64 |
| GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -5.233e+00 | 0.0305 | 8.0 | 1.08% | 168.0 | 0.35% | motif file (matrix) |
svg |
65 |
| MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.061e+00 | 0.0355 | 21.0 | 2.84% | 729.9 | 1.54% | motif file (matrix) |
svg |
66 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.018e+00 | 0.0365 | 46.0 | 6.22% | 1999.2 | 4.22% | motif file (matrix) |
svg |
67 |
| Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.748e+00 | 0.0471 | 9.0 | 1.22% | 220.7 | 0.47% | motif file (matrix) |
svg |
68 |
| Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer | 1e-2 | -4.694e+00 | 0.0490 | 7.0 | 0.95% | 147.9 | 0.31% | motif file (matrix) |
svg |
69 |
| Sp1(Zf)/Promoter/Homer | 1e-2 | -4.663e+00 | 0.0498 | 10.0 | 1.35% | 263.9 | 0.56% | motif file (matrix) |
svg |