Information for 7-TKBGCTTTGTCAATTG (Motif 9)

C G A T A C G T A C G T A C T G A G T C A G C T A C G T A G C T A T C G C G A T T A G C G C T A T G C A C G A T A C G T A C T G
Reverse Opposite:
G T A C G T C A C G T A A C G T C A G T A C T G C G T A A T G C C T G A C G T A C T G A A C T G T A G C T G C A T G C A C G T A
p-value:1e-14
log p-value:-3.288e+01
Information Content per bp:1.704
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.9 +/- 14.1bp
Average Position of motif in Background68.7 +/- 16.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TKBGCTTTGTCAATTG
ANTCCTTTGTCTNNNN
 C G A T A C G T A C G T A C T G A G T C A G C T A C G T A G C T A T C G C G A T T A G C G C T A T G C A C G A T A C G T A C T G
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TKBGCTTTGTCAATTG
----CTTTGT------
 C G A T A C G T A C G T A C T G A G T C A G C T A C G T A G C T A T C G C G A T T A G C G C T A T G C A C G A T A C G T A C T G
A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TKBGCTTTGTCAATTG
---CCWTTGTYYB---
 C G A T A C G T A C G T A C T G A G T C A G C T A C G T A G C T A T C G C G A T T A G C G C T A T G C A C G A T A C G T A C T G
A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:4
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TKBGCTTTGTCAATTG
---CCWTTGTY-----
 C G A T A C G T A C G T A C T G A G T C A G C T A C G T A G C T A T C G C G A T T A G C G C T A T G C A C G A T A C G T A C T G
A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TKBGCTTTGTCAATTG
TGGACTTTGNNCTNTG
 C G A T A C G T A C G T A C T G A G T C A G C T A C G T A G C T A T C G C G A T T A G C G C T A T G C A C G A T A C G T A C T G
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TKBGCTTTGTCAATTG
---YCTTTGTTCC---
 C G A T A C G T A C G T A C T G A G T C A G C T A C G T A G C T A T C G C G A T T A G C G C T A T G C A C G A T A C G T A C T G
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TKBGCTTTGTCAATTG
AGGVNCCTTTGT------
 A C G T A C G T C G A T A C G T A C G T A C T G A G T C A G C T A C G T A G C T A T C G C G A T T A G C G C T A T G C A C G A T A C G T A C T G
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:8
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TKBGCTTTGTCAATTG
---CCTTTGTT-----
 C G A T A C G T A C G T A C T G A G T C A G C T A C G T A G C T A T C G C G A T T A G C G C T A T G C A C G A T A C G T A C T G
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----TKBGCTTTGTCAATTG
NNTGTTTATTTTGGCA----
 A C G T A C G T A C G T A C G T C G A T A C G T A C G T A C T G A G T C A G C T A C G T A G C T A T C G C G A T T A G C G C T A T G C A C G A T A C G T A C T G
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.51
Offset:7
Orientation:forward strand
Alignment:TKBGCTTTGTCAATTG
-------TGTCANYT-
 C G A T A C G T A C G T A C T G A G T C A G C T A C G T A G C T A T C G C G A T T A G C G C T A T G C A C G A T A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T