Information for 2-SWGTGABTGACAG (Motif 2)

T A G C G C T A T C A G C G A T C T A G C G T A A G T C C A G T A C T G C G T A A T G C C G T A A C T G
Reverse Opposite:
T A G C C G A T A T C G A C G T T G A C G T C A T C A G A C G T A G T C C G T A A G T C C G A T A T C G
p-value:1e-35
log p-value:-8.085e+01
Information Content per bp:1.676
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif7.58%
Number of Background Sequences with motif375.3
Percentage of Background Sequences with motif0.79%
Average Position of motif in Targets42.6 +/- 22.3bp
Average Position of motif in Background53.0 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.95
Offset:2
Orientation:reverse strand
Alignment:SWGTGABTGACAG-
--NTGATTGACAGN
 T A G C G C T A T C A G C G A T C T A G C G T A A G T C C A G T A C T G C G T A A T G C C G T A A C T G A C G T
A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:2
Score:0.93
Offset:2
Orientation:reverse strand
Alignment:SWGTGABTGACAG-
--BTGABTGACAGS
 T A G C G C T A T C A G C G A T C T A G C G T A A G T C C A G T A C T G C G T A A T G C C G T A A C T G A C G T
A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.92
Offset:3
Orientation:reverse strand
Alignment:SWGTGABTGACAG--
---TGAGTGACAGSC
 T A G C G C T A T C A G C G A T C T A G C G T A A G T C C A G T A C T G C G T A A T G C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.79
Offset:6
Orientation:forward strand
Alignment:SWGTGABTGACAG-
------TTGACAGC
 T A G C G C T A T C A G C G A T C T A G C G T A A G T C C A G T A C T G C G T A A T G C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

MEIS3/MA0775.1/Jaspar

Match Rank:5
Score:0.79
Offset:6
Orientation:forward strand
Alignment:SWGTGABTGACAG-
------TTGACAGG
 T A G C G C T A T C A G C G A T C T A G C G T A A G T C C A G T A C T G C G T A A T G C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

MEIS1/MA0498.2/Jaspar

Match Rank:6
Score:0.79
Offset:6
Orientation:forward strand
Alignment:SWGTGABTGACAG
------TTGACAG
 T A G C G C T A T C A G C G A T C T A G C G T A A G T C C A G T A C T G C G T A A T G C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

PH0169.1_Tgif1/Jaspar

Match Rank:7
Score:0.78
Offset:2
Orientation:forward strand
Alignment:SWGTGABTGACAG------
--GATATTGACAGCTGCGT
 T A G C G C T A T C A G C G A T C T A G C G T A A G T C C A G T A C T G C G T A A T G C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

PH0141.1_Pknox2/Jaspar

Match Rank:8
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:SWGTGABTGACAG------
---NNATTGACAGGTGCTT
 T A G C G C T A T C A G C G A T C T A G C G T A A G T C C A G T A C T G C G T A A T G C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.76
Offset:5
Orientation:reverse strand
Alignment:SWGTGABTGACAG--
-----VBTGWCAGCB
 T A G C G C T A T C A G C G A T C T A G C G T A A G T C C A G T A C T G C G T A A T G C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

PH0140.1_Pknox1/Jaspar

Match Rank:10
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:SWGTGABTGACAG------
---GGATTGACAGGTCNTT
 T A G C G C T A T C A G C G A T C T A G C G T A A G T C C A G T A C T G C G T A A T G C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T