Information for 10-CATARWGYTTRTA (Motif 17)

A G T C C G T A A C G T C G T A C T A G C G A T C T A G A G C T A C G T A C G T C T A G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C C G T A C G T A C T G A A G T C C G T A A G T C A C G T T C G A A C G T A C T G
p-value:1e-11
log p-value:-2.561e+01
Information Content per bp:1.871
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.7 +/- 31.8bp
Average Position of motif in Background34.0 +/- 11.7bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxq1/MA0040.1/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CATARWGYTTRTA
--TATTGTTTATT
 A G T C C G T A A C G T C G T A C T A G C G A T C T A G A G C T A C G T A C G T C T A G A C G T C G T A
A C G T A C G T G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:2
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CATARWGYTTRTA---
----NTGTTTAYATWW
 A G T C C G T A A C G T C G T A C T A G C G A T C T A G A G C T A C G T A C G T C T A G A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:3
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CATARWGYTTRTA--
---CBTGTTTAYAWW
 A G T C C G T A A C G T C G T A C T A G C G A T C T A G A G C T A C G T A C G T C T A G A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T

FOXP3/MA0850.1/Jaspar

Match Rank:4
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CATARWGYTTRTA
-----TGTTTAC-
 A G T C C G T A A C G T C G T A C T A G C G A T C T A G A G C T A C G T A C G T C T A G A C G T C G T A
A C G T A C G T A C G T A C G T A C G T A G C T T C A G A G C T G A C T C G A T C T G A A G T C A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:5
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CATARWGYTTRTA-
-----TGTTTATTT
 A G T C C G T A A C G T C G T A C T A G C G A T C T A G A G C T A C G T A C G T C T A G A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T

Neurog1/MA0623.1/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CATARWGYTTRTA
ACCATATGGT-----
 A C G T A C G T A G T C C G T A A C G T C G T A C T A G C G A T C T A G A G C T A C G T A C G T C T A G A C G T C G T A
T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A T C G G A C T A C G T A C G T A C G T A C G T A C G T

FOXL1/MA0033.2/Jaspar

Match Rank:7
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CATARWGYTTRTA
-----TGTTTAC-
 A G T C C G T A A C G T C G T A C T A G C G A T C T A G A G C T A C G T A C G T C T A G A C G T C G T A
A C G T A C G T A C G T A C G T A C G T C A G T C T A G A C G T C A G T A C G T C T G A G A T C A C G T

FOXG1/MA0613.1/Jaspar

Match Rank:8
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:CATARWGYTTRTA
----TTGTTTAC-
 A G T C C G T A A C G T C G T A C T A G C G A T C T A G A G C T A C G T A C G T C T A G A C G T C G T A
A C G T A C G T A C G T A C G T C G A T A C G T A C T G A C G T A C G T A C G T C G T A A G T C A C G T

FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer

Match Rank:9
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CATARWGYTTRTA
--NVWTGTTTAC-
 A G T C C G T A A C G T C G T A C T A G C G A T C T A G A G C T A C G T A C G T C T A G A C G T C G T A
A C G T A C G T A G C T T G A C C G A T C G A T C T A G A C G T C A G T C A G T G C T A A G T C A C G T

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CATARWGYTTRTA
ATGCATWATGCATRW-
 A C G T A C G T A C G T A G T C C G T A A C G T C G T A C T A G C G A T C T A G A G C T A C G T A C G T C T A G A C G T C G T A
C G T A A C G T A C T G G T A C C G T A A C G T C G T A C G T A A C G T A C T G A G T C C G T A A C G T C T G A G C A T A C G T