Information for 9-AATCWATCAGTCTTGT (Motif 12)

C G T A C G T A C A G T G A T C C G A T T G C A A C G T G T A C C G T A A T C G A G C T G T A C A C G T A C G T C T A G C G A T
Reverse Opposite:
C G T A A G T C C G T A T C G A A C T G T C G A A T G C C G A T A C T G G T C A A C G T C G T A C T A G G C T A G C A T A C G T
p-value:1e-13
log p-value:-3.157e+01
Information Content per bp:1.706
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.3 +/- 13.5bp
Average Position of motif in Background68.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:1
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AATCWATCAGTCTTGT
TCATCAATCA-------
 A C G T C G T A C G T A C A G T G A T C C G A T T G C A A C G T G T A C C G T A A T C G A G C T G T A C A C G T A C G T C T A G C G A T
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:2
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AATCWATCAGTCTTGT
GYCATCMATCAT------
 A C G T A C G T C G T A C G T A C A G T G A T C C G A T T G C A A C G T G T A C C G T A A T C G A G C T G T A C A C G T A C G T C T A G C G A T
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:3
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AATCWATCAGTCTTGT
TAATCAATTA-------
 A C G T C G T A C G T A C A G T G A T C C G A T T G C A A C G T G T A C C G T A A T C G A G C T G T A C A C G T A C G T C T A G C G A T
C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PAX3/MA0780.1/Jaspar

Match Rank:4
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AATCWATCAGTCTTGT
TAATCGATTA-------
 A C G T C G T A C G T A C A G T G A T C C G A T T G C A A C G T G T A C C G T A A T C G A G C T G T A C A C G T A C G T C T A G C G A T
C G A T T C G A G T C A A G C T A G T C T C A G C T G A A C G T G A C T G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:5
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---AATCWATCAGTCTTGT
RGCCATYAATCA-------
 A C G T A C G T A C G T C G T A C G T A C A G T G A T C C G A T T G C A A C G T G T A C C G T A A T C G A G C T G T A C A C G T A C G T C T A G C G A T
C T A G T A C G G A T C T G A C T C G A A C G T G A C T G C T A T C G A A G C T G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PAX7/MA0680.1/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AATCWATCAGTCTTGT
TAATCGATTA-------
 A C G T C G T A C G T A C A G T G A T C C G A T T G C A A C G T G T A C C G T A A T C G A G C T G T A C A C G T A C G T C T A G C G A T
C G A T T G C A G T C A G A C T A G T C T C A G C G T A C G A T G A C T G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:7
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---AATCWATCAGTCTTGT
GAAGATCAATCACTAA---
 A C G T A C G T A C G T C G T A C G T A C A G T G A T C C G A T T G C A A C G T G T A C C G T A A T C G A G C T G T A C A C G T A C G T C T A G C G A T
T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:8
Score:0.50
Offset:6
Orientation:forward strand
Alignment:AATCWATCAGTCTTGT
------TCAGTCTT--
 C G T A C G T A C A G T G A T C C G A T T G C A A C G T G T A C C G T A A T C G A G C T G T A C A C G T A C G T C T A G C G A T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:9
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---AATCWATCAGTCTTGT
HNRAATCAAT---------
 A C G T A C G T A C G T C G T A C G T A C A G T G A T C C G A T T G C A A C G T G T A C C G T A A T C G A G C T G T A C A C G T A C G T C T A G C G A T
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFE2/MA0841.1/Jaspar

Match Rank:10
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:AATCWATCAGTCTTGT
----GATGAGTCATN-
 C G T A C G T A C A G T G A T C C G A T T G C A A C G T G T A C C G T A A T C G A G C T G T A C A C G T A C G T C T A G C G A T
A C G T A C G T A C G T A C G T T A C G T C G A A C G T C T A G T C G A A T C G C A G T G T A C C T G A A G C T A C T G A C G T