Information for 17-ACAGYGGGRAGMGCWG (Motif 24)

C T G A A G T C C G T A A C T G A G T C C A T G A C T G A T C G C T A G C G T A A C T G T G A C A C T G A G T C C G T A A C T G
Reverse Opposite:
A G T C C G A T A C T G G T A C A C T G A G T C A C G T A G T C A T G C A G T C G T A C C T A G A G T C A C G T A C T G A G C T
p-value:1e-10
log p-value:-2.320e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.7 +/- 23.4bp
Average Position of motif in Background53.0 +/- 11.7bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ACAGYGGGRAGMGCWG
CACAGCAGGGGG-----
 A C G T C T G A A G T C C G T A A C T G A G T C C A T G A C T G A T C G C T A G C G T A A C T G T G A C A C T G A G T C C G T A A C T G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ACAGYGGGRAGMGCWG
DCHCAGCAGGRGGCC---
 A C G T A C G T C T G A A G T C C G T A A C T G A G T C C A T G A C T G A T C G C T A G C G T A A C T G T G A C A C T G A G T C C G T A A C T G
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ACAGYGGGRAGMGCWG
CACAGCGGGGGGTC---
 A C G T C T G A A G T C C G T A A C T G A G T C C A T G A C T G A T C G C T A G C G T A A C T G T G A C A C T G A G T C C G T A A C T G
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ACAGYGGGRAGMGCWG
DCTCAGCAGG--------
 A C G T A C G T C T G A A G T C C G T A A C T G A G T C C A T G A C T G A T C G C T A G C G T A A C T G T G A C A C T G A G T C C G T A A C T G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ACAGYGGGRAGMGCWG
NCGCAGCGGGGGGTC---
 A C G T A C G T C T G A A G T C C G T A A C T G A G T C C A T G A C T G A T C G C T A G C G T A A C T G T G A C A C T G A G T C C G T A A C T G
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:ACAGYGGGRAGMGCWG
--GGCGGGAARN----
 C T G A A G T C C G T A A C T G A G T C C A T G A C T G A T C G C T A G C G T A A C T G T G A C A C T G A G T C C G T A A C T G
A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ACAGYGGGRAGMGCWG
NCNCAGCGGGGGGTC---
 A C G T A C G T C T G A A G T C C G T A A C T G A G T C C A T G A C T G A T C G C T A G C G T A A C T G T G A C A C T G A G T C C G T A A C T G
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ACAGYGGGRAGMGCWG
NAACAGCTGG--------
 A C G T A C G T C T G A A G T C C G T A A C T G A G T C C A T G A C T G A T C G C T A G C G T A A C T G T G A C A C T G A G T C C G T A A C T G
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:ACAGYGGGRAGMGCWG
--RGKGGGCGGAGC--
 C T G A A G T C C G T A A C T G A G T C C A T G A C T G A T C G C T A G C G T A A C T G T G A C A C T G A G T C C G T A A C T G
A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----ACAGYGGGRAGMGCWG
GAGCACAGCAGGACA-----
 A C G T A C G T A C G T A C G T C T G A A G T C C G T A A C T G A G T C C A T G A C T G A T C G C T A G C G T A A C T G T G A C A C T G A G T C C G T A A C T G
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T A C G T A C G T A C G T A C G T