Information for 2-GCCGTGCGTC (Motif 9)

A C T G A G T C A G T C A T C G A C G T A T C G A G T C A C T G A C G T A T G C
Reverse Opposite:
A T C G T G C A A G T C C T A G A T G C C G T A A T G C C T A G A C T G G T A C
p-value:1e-10
log p-value:-2.481e+01
Information Content per bp:1.865
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.0 +/- 26.4bp
Average Position of motif in Background77.4 +/- 12.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCCGTGCGTC
GGACGTGC---
 A C G T A C T G A G T C A G T C A T C G A C G T A T C G A G T C A C T G A C G T A T G C
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCCGTGCGTC
RTACGTGC---
 A C G T A C T G A G T C A G T C A T C G A C G T A T C G A G T C A C T G A C G T A T G C
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCCGTGCGTC--
NTGCCCTTGGGCGN
 A C G T A C G T A C T G A G T C A G T C A T C G A C G T A T C G A G T C A C T G A C G T A T G C A C G T A C G T
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCCGTGCGTC
TACGTGCV--
 A C T G A G T C A G T C A T C G A C G T A T C G A G T C A C T G A C G T A T G C
A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T A C G T

PB0147.1_Max_2/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCCGTGCGTC--
GTGCCACGCGACTG
 A C G T A C G T A C T G A G T C A G T C A T C G A C G T A T C G A G T C A C T G A C G T A T G C A C G T A C G T
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------GCCGTGCGTC-
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A T C G A C G T A T C G A G T C A C T G A C G T A T G C A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

TFAP2C/MA0524.2/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCCGTGCGTC-
TGCCCTNGGGCA
 A C G T A C T G A G T C A G T C A T C G A C G T A T C G A G T C A C T G A C G T A T G C A C G T
G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

TFAP2B/MA0811.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCCGTGCGTC-
TGCCCTNGGGCA
 A C G T A C T G A G T C A G T C A T C G A C G T A T C G A G T C A C T G A C G T A T G C A C G T
G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

PB0044.1_Mtf1_1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCCGTGCGTC----
GGGCCGTGTGCAAAAA
 A C G T A C G T A C T G A G T C A G T C A T C G A C G T A T C G A G T C A C T G A C G T A T G C A C G T A C G T A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

PB0199.1_Zfp161_2/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCCGTGCGTC--
NNGCNCTGCGCGGC
 A C G T A C G T A C T G A G T C A G T C A T C G A C G T A T C G A G T C A C T G A C G T A T G C A C G T A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C