Information for 1-CCCTTTGCTC (Motif 4)

T G A C G T A C A G T C G A C T G C A T C A G T C T A G G A T C C G A T T A G C
Reverse Opposite:
A T C G G C T A C T A G G A T C G T C A C G T A C T G A C T A G C A T G A C T G
p-value:1e-12
log p-value:-2.765e+01
Information Content per bp:1.679
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif7.55%
Number of Background Sequences with motif959.1
Percentage of Background Sequences with motif2.46%
Average Position of motif in Targets47.4 +/- 27.9bp
Average Position of motif in Background51.3 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0040.1_Lef1_1/Jaspar

Match Rank:1
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---CCCTTTGCTC----
AATCCCTTTGATCTATC
 A C G T A C G T A C G T T G A C G T A C A G T C G A C T G C A T C A G T C T A G G A T C C G A T T A G C A C G T A C G T A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:2
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---CCCTTTGCTC----
ATTTCCTTTGATCTATA
 A C G T A C G T A C G T T G A C G T A C A G T C G A C T G C A T C A G T C T A G G A T C C G A T T A G C A C G T A C G T A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CCCTTTGCTC-
-YCTTTGTTCC
 T G A C G T A C A G T C G A C T G C A T C A G T C T A G G A T C C G A T T A G C A C G T
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

LEF1/MA0768.1/Jaspar

Match Rank:4
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CCCTTTGCTC---
AACCCTTTGATCTTT
 A C G T A C G T T G A C G T A C A G T C G A C T G C A T C A G T C T A G G A T C C G A T T A G C A C G T A C G T A C G T
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:5
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CCCTTTGCTC-
TNCCTTTGATGT
 A C G T T G A C G T A C A G T C G A C T G C A T C A G T C T A G G A T C C G A T T A G C A C G T
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T

Tcf7/MA0769.1/Jaspar

Match Rank:6
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CCCTTTGCTC---
-CCTTTGATCTTT
 T G A C G T A C A G T C G A C T G C A T C A G T C T A G G A T C C G A T T A G C A C G T A C G T A C G T
A C G T A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T

PB0071.1_Sox4_1/Jaspar

Match Rank:7
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CCCTTTGCTC----
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T T G A C G T A C A G T C G A C T G C A T C A G T C T A G G A T C C G A T T A G C A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:8
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CCCTTTGCTC----
NNTTCCTTTGATCTANA
 A C G T A C G T A C G T T G A C G T A C A G T C G A C T G C A T C A G T C T A G G A T C C G A T T A G C A C G T A C G T A C G T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

Sox3/MA0514.1/Jaspar

Match Rank:9
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CCCTTTGCTC-
-CCTTTGTTTT
 T G A C G T A C A G T C G A C T G C A T C A G T C T A G G A T C C G A T T A G C A C G T
A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Sox2/MA0143.3/Jaspar

Match Rank:10
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CCCTTTGCTC
-CCTTTGTT-
 T G A C G T A C A G T C G A C T G C A T C A G T C T A G G A T C C G A T T A G C
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T