Information for 2-AATTGGCCAACAT (Motif 2)

C G T A C G T A A C G T A C G T A C T G A T C G G T A C G T A C C T G A C T G A A G T C C G T A C G A T
Reverse Opposite:
C G T A C G A T A C T G A G C T A G C T A C T G A C T G A T G C A G T C G T C A C G T A C G A T G A C T
p-value:1e-13
log p-value:-3.173e+01
Information Content per bp:1.812
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.3 +/- 14.8bp
Average Position of motif in Background49.3 +/- 6.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AATTGGCCAACAT
-ATTGCGCAAC--
 C G T A C G T A A C G T A C G T A C T G A T C G G T A C G T A C C T G A C T G A A G T C C G T A C G A T
A C G T T G C A A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A G T C A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AATTGGCCAACAT
CCGATTGGCT-----
 A C G T A C G T C G T A C G T A A C G T A C G T A C T G A T C G G T A C G T A C C T G A C T G A A G T C C G T A C G A T
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AATTGGCCAACAT
--TTGGCA-----
 C G T A C G T A A C G T A C G T A C T G A T C G G T A C G T A C C T G A C T G A A G T C C G T A C G A T
A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AATTGGCCAACAT
-ATTGCACAATA-
 C G T A C G T A A C G T A C G T A C T G A T C G G T A C G T A C C T G A C T G A A G T C C G T A C G A T
A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A A C G T

NFYB/MA0502.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AATTGGCCAACAT
CTGATTGGTCNATTT
 A C G T A C G T C G T A C G T A A C G T A C G T A C T G A T C G G T A C G T A C C T G A C T G A A G T C C G T A C G A T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AATTGGCCAACAT
TGATTGGCTANN--
 A C G T C G T A C G T A A C G T A C G T A C T G A T C G G T A C G T A C C T G A C T G A A G T C C G T A C G A T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AATTGGCCAACAT
-NTTGGCANN---
 C G T A C G T A A C G T A C G T A C T G A T C G G T A C G T A C C T G A C T G A A G T C C G T A C G A T
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T

MSX2/MA0708.1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AATTGGCCAACAT
NTAATTGG-------
 A C G T A C G T C G T A C G T A A C G T A C G T A C T G A T C G G T A C G T A C C T G A C T G A A G T C C G T A C G A T
A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MSX1/MA0666.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AATTGGCCAACAT
NTAATTGG-------
 A C G T A C G T C G T A C G T A A C G T A C G T A C T G A T C G G T A C G T A C C T G A C T G A A G T C C G T A C G A T
A G T C A C G T T G C A G T C A A C G T A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AATTGGCCAACAT
NNTTGGCANN---
 C G T A C G T A A C G T A C G T A C T G A T C G G T A C G T A C C T G A C T G A A G T C C G T A C G A T
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T