Information for 6-CCAGGGAAAT (Motif 19)

A G T C A G T C C G T A A C T G A C T G A C T G C G T A C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C T G A C T G
p-value:1e-4
log p-value:-1.052e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif9.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets59.2 +/- 32.9bp
Average Position of motif in Background40.9 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CCAGGGAAAT
CSTGGGAAAD
 A G T C A G T C C G T A A C T G A C T G A C T G C G T A C G T A C G T A A C G T
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CCAGGGAAAT
GTCCCCAGGGGA--
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G A C T G A C T G C G T A C G T A C G T A A C G T
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CCAGGGAAAT-
-NNTGGAAANN
 A G T C A G T C C G T A A C T G A C T G A C T G C G T A C G T A C G T A A C G T A C G T
A C G T C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T

NFAT5/MA0606.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CCAGGGAAAT-
-NATGGAAAAN
 A G T C A G T C C G T A A C T G A C T G A C T G C G T A C G T A C G T A A C G T A C G T
A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CCAGGGAAAT-
-AATGGAAAAT
 A G T C A G T C C G T A A C T G A C T G A C T G C G T A C G T A C G T A A C G T A C G T
A C G T C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T

PB0012.1_Elf3_1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCAGGGAAAT--
AACAAGGAAGTAA
 A C G T A G T C A G T C C G T A A C T G A C T G A C T G C G T A C G T A C G T A A C G T A C G T A C G T
C G A T C G T A G T A C T G C A T G C A C T A G C A T G C G T A G C T A T C A G G A C T C G T A T C G A

Stat6/MA0520.1/Jaspar

Match Rank:7
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CCAGGGAAAT
CATTTCCTGAGAAAT
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G A C T G A C T G C G T A C G T A C G T A A C G T
A T G C C G T A A G C T A C G T C G A T G T A C G A T C C G A T T A C G C T G A C A T G C G T A C T G A T G C A G A C T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CCAGGGAAAT----
----GGAAATTCCC
 A G T C A G T C C G T A A C T G A C T G A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

RELA/MA0107.1/Jaspar

Match Rank:9
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CCAGGGAAAT----
----GGAAATTCCC
 A G T C A G T C C G T A A C T G A C T G A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:10
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CCAGGGAAAT
GGTTGCCATGGCAA-
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G A C T G A C T G C G T A C G T A C G T A A C G T
C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A C G T