Information for 13-GATGGAGGTRACC (Motif 18)

A T C G T C G A A C G T A C T G A C T G C T G A T C A G C T A G A C G T C T G A T C G A A T G C G A T C
Reverse Opposite:
C A T G A T C G A G C T A G C T T G C A A G T C A G T C A G C T A G T C G T A C G T C A A C G T A T G C
p-value:1e-5
log p-value:-1.219e+01
Information Content per bp:1.716
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.68%
Number of Background Sequences with motif125.0
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets56.3 +/- 23.4bp
Average Position of motif in Background47.0 +/- 33.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.60
Offset:-8
Orientation:forward strand
Alignment:--------GATGGAGGTRACC
SMCAGTCWGAKGGAGGAGGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G T C G A A C G T A C T G A C T G C T G A T C A G C T A G A C G T C T G A T C G A A T G C G A T C
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C A C G T

E2F6/MA0471.1/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GATGGAGGTRACC
GGGCGGGAAGG----
 A C G T A C G T A T C G T C G A A C G T A C T G A C T G C T G A T C A G C T A G A C G T C T G A T C G A A T G C G A T C
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:3
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GATGGAGGTRACC
ATGATKGATGRC---
 A C G T A C G T A T C G T C G A A C G T A C T G A C T G C T G A T C A G C T A G A C G T C T G A T C G A A T G C G A T C
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GATGGAGGTRACC
GGCGGGAARN----
 A C G T A T C G T C G A A C G T A C T G A C T G C T G A T C A G C T A G A C G T C T G A T C G A A T G C G A T C
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:5
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GATGGAGGTRACC
TTTGATTGATGN----
 A C G T A C G T A C G T A T C G T C G A A C G T A C T G A C T G C T G A T C A G C T A G A C G T C T G A T C G A A T G C G A T C
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G A C G T A C G T A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GATGGAGGTRACC
TAATGGCGGNC---
 A C G T A T C G T C G A A C G T A C T G A C T G C T G A T C A G C T A G A C G T C T G A T C G A A T G C G A T C
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GATGGAGGTRACC
GRTGMTRGAGCC----
 A C G T A C G T A C G T A T C G T C G A A C G T A C T G A C T G C T G A T C A G C T A G A C G T C T G A T C G A A T G C G A T C
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T A C G T

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GATGGAGGTRACC----
--GGGCGATGACCAYTC
 A T C G T C G A A C G T A C T G A C T G C T G A T C A G C T A G A C G T C T G A T C G A A T G C G A T C A C G T A C G T A C G T A C G T
A C G T A C G T C T A G T A C G T C A G A G T C A C T G T G C A A G C T A C T G G T C A G T A C G A T C C T G A A G T C A C G T A T G C

PB0012.1_Elf3_1/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GATGGAGGTRACC
AACAAGGAAGTAA--
 A C G T A C G T A T C G T C G A A C G T A C T G A C T G C T G A T C A G C T A G A C G T C T G A T C G A A T G C G A T C
C G A T C G T A G T A C T G C A T G C A C T A G C A T G C G T A G C T A T C A G G A C T C G T A T C G A A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GATGGAGGTRACC
-GTGGAT------
 A T C G T C G A A C G T A C T G A C T G C T G A T C A G C T A G A C G T C T G A T C G A A T G C G A T C
A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T