Information for 19-CGCTGTTGAG (Motif 21)

A T G C A C T G A T G C A C G T A C T G A C G T A C G T A C T G T C G A A C T G
Reverse Opposite:
A G T C A G C T A G T C C G T A C G T A G T A C G T C A A T C G A G T C A T C G
p-value:1e-5
log p-value:-1.308e+01
Information Content per bp:1.864
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.14%
Number of Background Sequences with motif70.8
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets49.1 +/- 23.9bp
Average Position of motif in Background56.2 +/- 37.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CGCTGTTGAG---
AGGACGCTGTAAAGGGA
 A C G T A C G T A C G T A C G T A T G C A C T G A T G C A C G T A C T G A C G T A C G T A C T G T C G A A C T G A C G T A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

Rhox11/MA0629.1/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CGCTGTTGAG---
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T A C G T A T G C A C T G A T G C A C G T A C T G A C G T A C G T A C T G T C G A A C T G A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CGCTGTTGAG---
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T A C G T A T G C A C T G A T G C A C G T A C T G A C G T A C G T A C T G T C G A A C T G A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CGCTGTTGAG
GGCVGTTR--
 A T G C A C T G A T G C A C G T A C T G A C G T A C G T A C T G T C G A A C T G
C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CGCTGTTGAG
TGGCAGTTGG-
 A C G T A T G C A C T G A T G C A C G T A C T G A C G T A C G T A C T G T C G A A C T G
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CGCTGTTGAG
NGCTN-----
 A T G C A C T G A T G C A C G T A C T G A C G T A C G T A C T G T C G A A C T G
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CGCTGTTGAG
BRRCVGTTDN-
 A C G T A T G C A C T G A T G C A C G T A C T G A C G T A C G T A C T G T C G A A C T G
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T

Tcf21/MA0832.1/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CGCTGTTGAG
NCAACAGCTGTTGC-
 A C G T A C G T A C G T A C G T A C G T A T G C A C T G A T G C A C G T A C T G A C G T A C G T A C T G T C G A A C T G
T C G A A G T C C T G A T G C A A G T C C G T A T A C G G T A C A C G T A C T G A C G T G A C T C T A G A G T C A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CGCTGTTGAG
-GCTGTG---
 A T G C A C T G A T G C A C G T A C T G A C G T A C G T A C T G T C G A A C T G
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CGCTGTTGAG--
CACGGCAGTTGGTNN
 A C G T A C G T A C G T A T G C A C T G A T G C A C G T A C T G A C G T A C G T A C T G T C G A A C T G A C G T A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G