Information for 8-CCTCAGACMTSCG (Motif 10)

A T G C A G T C A C G T A G T C C G T A A C T G C T G A A G T C G T A C A C G T A T C G A T G C A C T G
Reverse Opposite:
A G T C A T C G A T G C C G T A A C T G A C T G A G C T A G T C A C G T A C T G C G T A A C T G A T C G
p-value:1e-11
log p-value:-2.597e+01
Information Content per bp:1.911
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets67.7 +/- 13.3bp
Average Position of motif in Background11.8 +/- 3.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX1/MA0805.1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CCTCAGACMTSCG
--TCACACCT---
 A T G C A G T C A C G T A G T C C G T A A C T G C T G A A G T C G T A C A C G T A T C G A T G C A C T G
A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CCTCAGACMTSCG
--TCACACCT---
 A T G C A G T C A C G T A G T C C G T A A C T G C T G A A G T C G T A C A C G T A T C G A T G C A C T G
A C G T A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CCTCAGACMTSCG
--TCACACCT---
 A T G C A G T C A C G T A G T C C G T A A C T G C T G A A G T C G T A C A C G T A T C G A T G C A C T G
A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCTCAGACMTSCG
TGACCTCTGACCCCN-
 A C G T A C G T A C G T A T G C A G T C A C G T A G T C C G T A A C T G C T G A A G T C G T A C A C G T A T C G A T G C A C T G
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCTCAGACMTSCG
--CCAGACRSVB-
 A T G C A G T C A C G T A G T C C G T A A C T G C T G A A G T C G T A C A C G T A T C G A T G C A C T G
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T

TBX4/MA0806.1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCTCAGACMTSCG
--TCACACCT---
 A T G C A G T C A C G T A G T C C G T A A C T G C T G A A G T C G T A C A C G T A T C G A T G C A C T G
A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCTCAGACMTSCG
CTTCACACCTA--
 A T G C A G T C A C G T A G T C C G T A A C T G C T G A A G T C G T A C A C G T A T C G A T G C A C T G
A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCTCAGACMTSCG
TGACCTTTGACCTC--
 A C G T A C G T A C G T A T G C A G T C A C G T A G T C C G T A A C T G C T G A A G T C G T A C A C G T A T C G A T G C A C T G
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCTCAGACMTSCG
AGCCTCAGGCA----
 A C G T A C G T A T G C A G T C A C G T A G T C C G T A A C T G C T G A A G T C G T A C A C G T A T C G A T G C A C T G
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CCTCAGACMTSCG-
CAAATCCAGACATCACA
 A C G T A C G T A C G T A T G C A G T C A C G T A G T C C G T A A C T G C T G A A G T C G T A C A C G T A T C G A T G C A C T G A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A