Information for 4-GGGCTGTCCCTCAGTC (Motif 9)

A C T G T A C G A T C G A G T C C G A T A C T G C G A T A G T C A G T C A G T C A C G T A T G C C G T A A C T G A G C T A G T C
Reverse Opposite:
A C T G T C G A T A G C A C G T T A C G C G T A A C T G A C T G C T A G C G T A A G T C C G T A A C T G A T G C A T G C T G A C
p-value:1e-10
log p-value:-2.464e+01
Information Content per bp:1.780
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.4 +/- 25.2bp
Average Position of motif in Background38.8 +/- 9.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GGGCTGTCCCTCAGTC
-GSCTGTCACTCA---
 A C T G T A C G A T C G A G T C C G A T A C T G C G A T A G T C A G T C A G T C A C G T A T G C C G T A A C T G A G C T A G T C
A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GGGCTGTCCCTCAGTC
--NCTGTCAATCAN--
 A C T G T A C G A T C G A G T C C G A T A C T G C G A T A G T C A G T C A G T C A C G T A T G C C G T A A C T G A G C T A G T C
A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GGGCTGTCCCTCAGTC
---CTGTTCCTGG---
 A C T G T A C G A T C G A G T C C G A T A C T G C G A T A G T C A G T C A G T C A C G T A T G C C G T A A C T G A G C T A G T C
A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GGGCTGTCCCTCAGTC
--SCTGTCAVTCAV--
 A C T G T A C G A T C G A G T C C G A T A C T G C G A T A G T C A G T C A G T C A C G T A T G C C G T A A C T G A G C T A G T C
A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGGCTGTCCCTCAGTC---
GAGCCTGGTACTGWGCCTGR
 A C G T A C T G T A C G A T C G A G T C C G A T A C T G C G A T A G T C A G T C A G T C A C G T A T G C C G T A A C T G A G C T A G T C A C G T A C G T A C G T
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GGGCTGTCCCTCAGTC
--GCTGTG--------
 A C T G T A C G A T C G A G T C C G A T A C T G C G A T A G T C A G T C A G T C A C G T A T G C C G T A A C T G A G C T A G T C
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGGCTGTCCCTCAGTC---
GGAGCTGTCCATGGTGCTGA
 A C G T A C T G T A C G A T C G A G T C C G A T A C T G C G A T A G T C A G T C A G T C A C G T A T G C C G T A A C T G A G C T A G T C A C G T A C G T A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

REST/MA0138.2/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGGCTGTCCCTCAGTC----
GGCGCTGTCCATGGTGCTGAA
 A C G T A C T G T A C G A T C G A G T C C G A T A C T G C G A T A G T C A G T C A G T C A C G T A T G C C G T A A C T G A G C T A G T C A C G T A C G T A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GGGCTGTCCCTCAGTC
-TKCTGTTCCA-----
 A C T G T A C G A T C G A G T C C G A T A C T G C G A T A G T C A G T C A G T C A C G T A T G C C G T A A C T G A G C T A G T C
A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T A C G T A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GGGCTGTCCCTCAGTC
AAGCACCTGTCAATAT---
 A C G T A C G T A C G T A C T G T A C G A T C G A G T C C G A T A C T G C G A T A G T C A G T C A G T C A C G T A T G C C G T A A C T G A G C T A G T C
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T A C G T A C G T A C G T