Information for 5-CAGSAGATGRCGC (Motif 8)

A G T C G T C A A C T G T A C G C G T A A C T G C G T A A C G T A C T G T C A G A T G C C T A G A G T C
Reverse Opposite:
A C T G A G T C A T C G A G T C G T A C T C G A A C G T A G T C A C G T A T G C A G T C A C G T A C T G
p-value:1e-10
log p-value:-2.464e+01
Information Content per bp:1.911
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.6 +/- 22.9bp
Average Position of motif in Background43.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0139.1/Jaspar

Match Rank:1
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----CAGSAGATGRCGC--
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A G T C G T C A A C T G T A C G C G T A A C T G C G T A A C G T A C T G T C A G A T G C C T A G A G T C A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CAGSAGATGRCGC---
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A G T C G T C A A C T G T A C G C G T A A C T G C G T A A C G T A C T G T C A G A T G C C T A G A G T C A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CAGSAGATGRCGC-----
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A G T C G T C A A C T G T A C G C G T A A C T G C G T A A C G T A C T G T C A G A T G C C T A G A G T C A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CAGSAGATGRCGC
-AACAGATGGC--
 A G T C G T C A A C T G T A C G C G T A A C T G C G T A A C G T A C T G T C A G A T G C C T A G A G T C
A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T

Atf3/MA0605.1/Jaspar

Match Rank:5
Score:0.64
Offset:5
Orientation:forward strand
Alignment:CAGSAGATGRCGC
-----GATGACGT
 A G T C G T C A A C T G T A C G C G T A A C T G C G T A A C G T A C T G T C A G A T G C C T A G A G T C
A C G T A C G T A C G T A C G T A C G T A T C G C T G A A C G T A C T G C G T A A G T C C T A G G A C T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CAGSAGATGRCGC
-AACAGATGGT--
 A G T C G T C A A C T G T A C G C G T A A C T G C G T A A C G T A C T G T C A G A T G C C T A G A G T C
A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CAGSAGATGRCGC
NACAGGAAAT-----
 A C G T A C G T A G T C G T C A A C T G T A C G C G T A A C T G C G T A A C G T A C T G T C A G A T G C C T A G A G T C
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CAGSAGATGRCGC
VNAVCAGCTGGC--
 A C G T A G T C G T C A A C T G T A C G C G T A A C T G C G T A A C G T A C T G T C A G A T G C C T A G A G T C
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CAGSAGATGRCGC-
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T A G T C G T C A A C T G T A C G C G T A A C T G C G T A A C G T A C T G T C A G A T G C C T A G A G T C A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAGSAGATGRCGC--
AAGGCCAGATGGTCCGG
 A C G T A C G T A G T C G T C A A C T G T A C G C G T A A C T G C G T A A C G T A C T G T C A G A T G C C T A G A G T C A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G