p-value: | 1e-16 |
log p-value: | -3.825e+01 |
Information Content per bp: | 1.807 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 1.03% |
Number of Background Sequences with motif | 0.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 61.5 +/- 26.6bp |
Average Position of motif in Background | 0.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer
Match Rank: | 1 |
Score: | 0.79 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GTAGTTHCCCGGCAAC- --TGTTKCCTAGCAACM |
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Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
Match Rank: | 2 |
Score: | 0.72 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | GTAGTTHCCCGGCAAC-- ------SCCTAGCAACAG |
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PB0055.1_Rfx4_1/Jaspar
Match Rank: | 3 |
Score: | 0.69 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GTAGTTHCCCGGCAAC--- ----TACCATAGCAACGGT |
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PB0056.1_Rfxdc2_1/Jaspar
Match Rank: | 4 |
Score: | 0.68 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GTAGTTHCCCGGCAAC--- ----CCGCATAGCAACGGA |
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PB0054.1_Rfx3_1/Jaspar
Match Rank: | 5 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GTAGTTHCCCGGCAAC------- TGTGACCCTTAGCAACCGATTAA |
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Rfx1/MA0509.1/Jaspar
Match Rank: | 6 |
Score: | 0.63 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GTAGTTHCCCGGCAAC --GTTGCCATGGCAAC |
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Stat4/MA0518.1/Jaspar
Match Rank: | 7 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GTAGTTHCCCGGCAAC -NNNTTTCCTGGAAA- |
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E2F8/MA0865.1/Jaspar
Match Rank: | 8 |
Score: | 0.57 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GTAGTTHCCCGGCAAC ----TTTCCCGCCAAA |
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X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 9 |
Score: | 0.57 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GTAGTTHCCCGGCAAC- ---TTGCCATGGCAACC |
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Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 10 |
Score: | 0.57 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GTAGTTHCCCGGCAAC- ---TTGCCATGGCAACN |
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