Information for 3-CACTTTCYAAGGGAGA (Motif 4)

A G T C C G T A A T G C A C G T G A C T G A C T A G T C A G C T G C T A C T G A A T C G A C T G A C T G C T G A A C T G T C G A
Reverse Opposite:
A G C T A G T C A G C T A G T C A G T C A T G C A G C T C G A T C T G A A C T G C G T A C T G A C G T A T A C G A C G T C T A G
p-value:1e-16
log p-value:-3.825e+01
Information Content per bp:1.754
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.5 +/- 26.9bp
Average Position of motif in Background28.5 +/- 14.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CACTTTCYAAGGGAGA
--GTCCCCAGGGGA--
 A G T C C G T A A T G C A C G T G A C T G A C T A G T C A G C T G C T A C T G A A T C G A C T G A C T G C T G A A C T G T C G A
A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:2
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CACTTTCYAAGGGAGA
----TCCCNNGGGACN
 A G T C C G T A A T G C A C G T G A C T G A C T A G T C A G C T G C T A C T G A A T C G A C T G A C T G C T G A A C T G T C G A
A C G T A C G T A C G T A C G T G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.54
Offset:10
Orientation:reverse strand
Alignment:CACTTTCYAAGGGAGA
----------CGGAGC
 A G T C C G T A A T G C A C G T G A C T G A C T A G T C A G C T G C T A C T G A A T C G A C T G A C T G C T G A A C T G T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

EBF1/MA0154.3/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CACTTTCYAAGGGAGA
--ATTCCCAAGGGAAT
 A G T C C G T A A T G C A C G T G A C T G A C T A G T C A G C T G C T A C T G A A T C G A C T G A C T G C T G A A C T G T C G A
A C G T A C G T C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T

PB0158.1_Rfx3_2/Jaspar

Match Rank:5
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----CACTTTCYAAGGGAGA--
NNTNGNNGTAACCAAGNNNNAGN
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T G C A C G T G A C T G A C T A G T C A G C T G C T A C T G A A T C G A C T G A C T G C T G A A C T G T C G A A C G T A C G T
T A G C G C A T A G C T A G C T A C T G A G C T A C T G C A T G G A C T G T C A G C T A T A G C A G T C C G T A C G T A T A C G A T C G T A C G C G A T T A G C T G C A C T A G A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.53
Offset:10
Orientation:reverse strand
Alignment:CACTTTCYAAGGGAGA----
----------GGGAGGACNG
 A G T C C G T A A T G C A C G T G A C T G A C T A G T C A G C T G C T A C T G A A T C G A C T G A C T G C T G A A C T G T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CACTTTCYAAGGGAGA
CTGTTGCTAGGS----
 A G T C C G T A A T G C A C G T G A C T G A C T A G T C A G C T G C T A C T G A A T C G A C T G A C T G C T G A A C T G T C G A
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G A C G T A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CACTTTCYAAGGGAGA
--NTGCCCANNGGTNA
 A G T C C G T A A T G C A C G T G A C T G A C T A G T C A G C T G C T A C T G A A T C G A C T G A C T G C T G A A C T G T C G A
A C G T A C G T T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

PB0054.1_Rfx3_1/Jaspar

Match Rank:9
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----CACTTTCYAAGGGAGA--
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T G C A C G T G A C T G A C T A G T C A G C T G C T A C T G A A T C G A C T G A C T G C T G A A C T G T C G A A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

PB0159.1_Rfx4_2/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CACTTTCYAAGGGAGA
NNNGTAACTANGNNA--
 A C G T A G T C C G T A A T G C A C G T G A C T G A C T A G T C A G C T G C T A C T G A A T C G A C T G A C T G C T G A A C T G T C G A
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A A C G T A C G T