Information for 18-TCTCMNSCTTCAMAKK (Motif 21)

A G C T A T G C A G C T G A T C G T A C G C T A T A C G G A T C C G A T A C G T T A G C C T G A T G A C C G T A A C G T A C T G
Reverse Opposite:
T G A C T G C A G C A T A C T G G A C T A C T G T G C A C G T A C A T G A T G C C G A T C A T G C A T G C T G A T A C G C T G A
p-value:1e-11
log p-value:-2.549e+01
Information Content per bp:1.604
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.7 +/- 32.4bp
Average Position of motif in Background50.1 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.58
Offset:6
Orientation:forward strand
Alignment:TCTCMNSCTTCAMAKK
------GCTTCC----
 A G C T A T G C A G C T G A T C G T A C G C T A T A C G G A T C C G A T A C G T T A G C C T G A T G A C C G T A A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:2
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TCTCMNSCTTCAMAKK
GKMTCADRTTWC-----
 A C G T A G C T A T G C A G C T G A T C G T A C G C T A T A C G G A T C C G A T A C G T T A G C C T G A T G A C C G T A A C G T A C T G
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T A C G T A C G T A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:3
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TCTCMNSCTTCAMAKK
GKVTCADRTTWC-----
 A C G T A G C T A T G C A G C T G A T C G T A C G C T A T A C G G A T C C G A T A C G T T A G C C T G A T G A C C G T A A C G T A C T G
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T A C G T A C G T A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TCTCMNSCTTCAMAKK---
GCCTCCTCCMTCWGACTGKS
 A C G T A G C T A T G C A G C T G A T C G T A C G C T A T A C G G A T C C G A T A C G T T A G C C T G A T G A C C G T A A C G T A C T G A C G T A C G T A C G T
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:5
Score:0.50
Offset:6
Orientation:forward strand
Alignment:TCTCMNSCTTCAMAKK
------ACWTCAAAGG
 A G C T A T G C A G C T G A T C G T A C G C T A T A C G G A T C C G A T A C G T T A G C C T G A T G A C C G T A A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G

Pax6/MA0069.1/Jaspar

Match Rank:6
Score:0.50
Offset:1
Orientation:forward strand
Alignment:TCTCMNSCTTCAMAKK
-TTCACGCATGAGTT-
 A G C T A T G C A G C T G A T C G T A C G C T A T A C G G A T C C G A T A C G T T A G C C T G A T G A C C G T A A C G T A C T G
A C G T A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TCTCMNSCTTCAMAKK
TCNCCTGCTGNGNNN-
 A G C T A T G C A G C T G A T C G T A C G C T A T A C G G A T C C G A T A C G T T A G C C T G A T G A C C G T A A C G T A C T G
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:TCTCMNSCTTCAMAKK
TNTCCTGCTGTGNNG-
 A G C T A T G C A G C T G A T C G T A C G C T A T A C G G A T C C G A T A C G T T A G C C T G A T G A C C G T A A C G T A C T G
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-TCTCMNSCTTCAMAKK
GGCTCYAKCAYC-----
 A C G T A G C T A T G C A G C T G A T C G T A C G C T A T A C G G A T C C G A T A C G T T A G C C T G A T G A C C G T A A C G T A C T G
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C A C G T A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.48
Offset:6
Orientation:forward strand
Alignment:TCTCMNSCTTCAMAKK
------ACATCAAAGG
 A G C T A T G C A G C T G A T C G T A C G C T A T A C G G A T C C G A T A C G T T A G C C T G A T G A C C G T A A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G