Information for 6-CAGAGGGYCRTGT (Motif 6)

G T A C C T G A A C T G C T G A C T A G C T A G A C T G G A T C A T G C T C A G A C G T A C T G A G C T
Reverse Opposite:
C T G A A G T C C G T A A G T C A T C G C T A G A G T C A G T C A G T C A G C T A G T C A G C T A C T G
p-value:1e-15
log p-value:-3.667e+01
Information Content per bp:1.742
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.7 +/- 26.8bp
Average Position of motif in Background36.0 +/- 12.8bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

KLF13/MA0657.1/Jaspar

Match Rank:1
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CAGAGGGYCRTGT---
CAAAAAGGGGCGTGGCAT
 A C G T A C G T G T A C C T G A A C T G C T G A C T A G C T A G A C T G G A T C A T G C T C A G A C G T A C T G A G C T A C G T A C G T A C G T
G T A C G T C A G T C A G T C A C T G A C T G A C A T G C T A G A C T G C T A G G A T C T A C G A G C T C A T G C A T G G A T C G T C A G A C T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CAGAGGGYCRTGT
-RGKGGGCGGAGC
 G T A C C T G A A C T G C T G A C T A G C T A G A C T G G A T C A T G C T C A G A C G T A C T G A G C T
A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----CAGAGGGYCRTGT--
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A C G T G T A C C T G A A C T G C T G A C T A G C T A G A C T G G A T C A T G C T C A G A C G T A C T G A G C T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CAGAGGGYCRTGT
AACAGATGGC-----
 A C G T A C G T G T A C C T G A A C T G C T G A C T A G C T A G A C T G G A T C A T G C T C A G A C G T A C T G A G C T
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:5
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CAGAGGGYCRTGT
-AGGVNCCTTTGT
 G T A C C T G A A C T G C T G A C T A G C T A G A C T G G A T C A T G C T C A G A C G T A C T G A G C T
A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.52
Offset:-7
Orientation:reverse strand
Alignment:-------CAGAGGGYCRTGT
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C T G A A C T G C T G A C T A G C T A G A C T G G A T C A T G C T C A G A C G T A C T G A G C T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

KLF14/MA0740.1/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CAGAGGGYCRTGT--
-AAGGGGGCGTGGCC
 G T A C C T G A A C T G C T G A C T A G C T A G A C T G G A T C A T G C T C A G A C G T A C T G A G C T A C G T A C G T
A C G T C T G A C T G A C T A G C A T G T C A G T C A G A T C G A G T C C A T G A C G T T C A G C A T G A G T C G T A C

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CAGAGGGYCRTGT--
VAGRACAKNCTGTBC
 G T A C C T G A A C T G C T G A C T A G C T A G A C T G G A T C A T G C T C A G A C G T A C T G A G C T A C G T A C G T
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:9
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----CAGAGGGYCRTGT
AAGGCCAGATGGTCCGG-
 A C G T A C G T A C G T A C G T A C G T G T A C C T G A A C T G C T G A C T A G C T A G A C T G G A T C A T G C T C A G A C G T A C T G A G C T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CAGAGGGYCRTGT--
NNVDGGGYGGGGCYN
 G T A C C T G A A C T G C T G A C T A G C T A G A C T G G A T C A T G C T C A G A C G T A C T G A G C T A C G T A C G T
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A