Information for 17-CCTATCCAAT (Motif 32)

A T G C A G T C A C G T C T G A A C G T G T A C A G T C C G T A G T C A A C G T
Reverse Opposite:
T C G A A C G T A C G T A C T G A C T G C G T A A G C T C G T A A C T G A T C G
p-value:1e-9
log p-value:-2.092e+01
Information Content per bp:1.869
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets52.8 +/- 25.0bp
Average Position of motif in Background62.0 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCTATCCAAT--
ACTAGCCAATCA
 A T G C A G T C A C G T C T G A A C G T G T A C A G T C C G T A G T C A A C G T A C G T A C G T
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:2
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CCTATCCAAT---
NTNNCGTATCCAAGTNN
 A C G T A C G T A C G T A C G T A T G C A G T C A C G T C T G A A C G T G T A C A G T C C G T A G T C A A C G T A C G T A C G T A C G T
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CCTATCCAAT---
---AGCCAATCGG
 A T G C A G T C A C G T C T G A A C G T G T A C A G T C C G T A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

PB0098.1_Zfp410_1/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCTATCCAAT----
NNNTCCATCCCATAANN
 A C G T A C G T A C G T A T G C A G T C A C G T C T G A A C G T G T A C A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

PB0068.1_Sox1_1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCTATCCAAT----
AATCAATTCAATAATT
 A C G T A C G T A T G C A G T C A C G T C T G A A C G T G T A C A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CCTATCCAAT
---ATCCAC-
 A T G C A G T C A C G T C T G A A C G T G T A C A G T C C G T A G T C A A C G T
A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CCTATCCAAT--
ANNTNCCCACCCANNAC
 A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T C T G A A C G T G T A C A G T C C G T A G T C A A C G T A C G T A C G T
G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C

NFYB/MA0502.1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCTATCCAAT---
AAATGGACCAATCAG
 A C G T A C G T A T G C A G T C A C G T C T G A A C G T G T A C A G T C C G T A G T C A A C G T A C G T A C G T A C G T
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

PB0105.1_Arid3a_2/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CCTATCCAAT--
ACCCGTATCAAATTT
 A C G T A C G T A C G T A T G C A G T C A C G T C T G A A C G T G T A C A G T C C G T A G T C A A C G T A C G T A C G T
G T C A G T A C T G A C T A G C T C A G A G C T T C G A A G C T T A G C C T G A C G T A T C G A C G A T G A C T C A G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:10
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------CCTATCCAAT
NTCNTCCCCTATNNGNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T C T G A A C G T G T A C A G T C C G T A G T C A A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A