Information for 4-SCRCCTCCCTSAGGCC (Motif 11)

T A C G G T A C T C G A A T G C A G T C A C G T A G T C A G T C G T A C A G C T A T G C C G T A A C T G A C T G A G T C A T G C
Reverse Opposite:
A T C G A C T G A G T C A G T C C G A T A T C G T C G A C A T G A C T G A C T G C G T A A C T G A T C G A G C T A C T G A T G C
p-value:1e-13
log p-value:-3.162e+01
Information Content per bp:1.810
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets49.6 +/- 24.7bp
Average Position of motif in Background46.2 +/- 16.3bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-SCRCCTCCCTSAGGCC---
GCCTCCTCCMTCWGACTGKS
 A C G T T A C G G T A C T C G A A T G C A G T C A C G T A G T C A G T C G T A C A G C T A T G C C G T A A C T G A C T G A G T C A T G C A C G T A C G T A C G T
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:2
Score:0.67
Offset:6
Orientation:forward strand
Alignment:SCRCCTCCCTSAGGCC--
------SCCTSAGGSCAW
 T A C G G T A C T C G A A T G C A G T C A C G T A G T C A G T C G T A C A G C T A T G C C G T A A C T G A C T G A G T C A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:SCRCCTCCCTSAGGCC--
------GCCTCAGGGCAT
 T A C G G T A C T C G A A T G C A G T C A C G T A G T C A G T C G T A C A G C T A T G C C G T A A C T G A C T G A G T C A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

TFAP2A/MA0003.3/Jaspar

Match Rank:4
Score:0.62
Offset:5
Orientation:forward strand
Alignment:SCRCCTCCCTSAGGCC
-----CGCCTCAGGCA
 T A C G G T A C T C G A A T G C A G T C A C G T A G T C A G T C G T A C A G C T A T G C C G T A A C T G A C T G A G T C A T G C
A C G T A C G T A C G T A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:5
Score:0.62
Offset:4
Orientation:forward strand
Alignment:SCRCCTCCCTSAGGCC
----TGCCCCCGGGCA
 T A C G G T A C T C G A A T G C A G T C A C G T A G T C A G T C G T A C A G C T A T G C C G T A A C T G A C T G A G T C A T G C
A C G T A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:SCRCCTCCCTSAGGCC--
---ATTGCCTGAGGCAAT
 T A C G G T A C T C G A A T G C A G T C A C G T A G T C A G T C G T A C A G C T A T G C C G T A A C T G A C T G A G T C A T G C A C G T A C G T
A C G T A C G T A C G T G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----SCRCCTCCCTSAGGCC
CNNBRGCGCCCCCTGSTGGC-
 A C G T A C G T A C G T A C G T A C G T T A C G G T A C T C G A A T G C A G T C A C G T A G T C A G T C G T A C A G C T A T G C C G T A A C T G A C T G A G T C A T G C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:8
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:SCRCCTCCCTSAGGCC
-----NGCCTNAGGCN
 T A C G G T A C T C G A A T G C A G T C A C G T A G T C A G T C G T A C A G C T A T G C C G T A A C T G A C T G A G T C A T G C
A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:9
Score:0.61
Offset:5
Orientation:forward strand
Alignment:SCRCCTCCCTSAGGCC
-----AGCCTCAGGCA
 T A C G G T A C T C G A A T G C A G T C A C G T A G T C A G T C G T A C A G C T A T G C C G T A A C T G A C T G A G T C A T G C
A C G T A C G T A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:SCRCCTCCCTSAGGCC--
---ATTGCCTGAGGCGAA
 T A C G G T A C T C G A A T G C A G T C A C G T A G T C A G T C G T A C A G C T A T G C C G T A A C T G A C T G A G T C A T G C A C G T A C G T
A C G T A C G T A C G T C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A