Information for 12-TGGCATTCTA (Motif 35)

A C G T A C T G A C T G A G T C C G T A A C G T A C G T A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G C G T A C G T A A C G T A C T G A G T C A G T C C G T A
p-value:1e-6
log p-value:-1.400e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.2 +/- 28.4bp
Average Position of motif in Background50.7 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TGGCATTCTA
GGTTGGCAT----
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C G T A C G T A G T C A C G T C G T A
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TGGCATTCTA-
-CACATTCCAT
 A C G T A C T G A C T G A G T C C G T A A C G T A C G T A G T C A C G T C G T A A C G T
A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGGCATTCTA
NTTGGCANN---
 A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C G T A C G T A G T C A C G T C G T A
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGGCATTCTA
TTGGCA-----
 A C G T A C G T A C T G A C T G A G T C C G T A A C G T A C G T A G T C A C G T C G T A
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TGGCATTCTA
NNTTGGCANN---
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C G T A C G T A G T C A C G T C G T A
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:6
Score:0.63
Offset:-7
Orientation:reverse strand
Alignment:-------TGGCATTCTA
NGTAGGTTGGCATNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C G T A C G T A G T C A C G T C G T A
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGGCATTCTA-
-CACATTCCAT
 A C G T A C T G A C T G A G T C C G T A A C G T A C G T A G T C A C G T C G T A A C G T
A C G T G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T

TEAD3/MA0808.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TGGCATTCTA
--ACATTCCA
 A C G T A C T G A C T G A G T C C G T A A C G T A C G T A G T C A C G T C G T A
A C G T A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A

PB0169.1_Sox15_2/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TGGCATTCTA
TTGAATGAAATTCGA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C G T A C G T A G T C A C G T C G T A
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TGGCATTCTA
NGTGGGCAT----
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C G T A C G T A G T C A C G T C G T A
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T