Information for 21-TCTGACAAAAGAA (Motif 34)

C G A T A G T C G A C T A T C G G T C A T A G C G C T A G T C A G T C A C G T A A C T G C G T A C G T A
Reverse Opposite:
G C A T A C G T A G T C C G A T A C G T A C G T C G A T A T C G A C G T A T G C C G T A C T A G C G T A
p-value:1e-6
log p-value:-1.405e+01
Information Content per bp:1.714
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif52.2
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets48.5 +/- 22.6bp
Average Position of motif in Background50.2 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TCTGACAAAAGAA-
AAACAGACAAAGGAAT
 A C G T A C G T C G A T A G T C G A C T A T C G G T C A T A G C G C T A G T C A G T C A C G T A A C T G C G T A C G T A A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:2
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TCTGACAAAAGAA---
----AGAAACGAAAGT
 C G A T A G T C G A C T A T C G G T C A T A G C G C T A G T C A G T C A C G T A A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T

PB0021.1_Gata3_1/Jaspar

Match Rank:3
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TCTGACAAAAGAA------
TTTTTAGAGATAAGAAATAAAG
 A C G T A C G T A C G T C G A T A G T C G A C T A T C G G T C A T A G C G C T A G T C A G T C A C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

GATA2/MA0036.2/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TCTGACAAAAGAA---
--NCAGATAAGAANNN
 C G A T A G T C G A C T A T C G G T C A T A G C G C T A G T C A G T C A C G T A A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TCTGACAAAAGAA
---RACAAWGG--
 C G A T A G T C G A C T A T C G G T C A T A G C G C T A G T C A G T C A C G T A A C T G C G T A C G T A
A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TCTGACAAAAGAA
--ANAGATAAGAA
 C G A T A G T C G A C T A T C G G T C A T A G C G C T A G T C A G T C A C G T A A C T G C G T A C G T A
A C G T A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TCTGACAAAAGAA
--GGAACAAAGR-
 C G A T A G T C G A C T A T C G G T C A T A G C G C T A G T C A G T C A C G T A A C T G C G T A C G T A
A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TCTGACAAAAGAA
AATATTAATAAAGA-
 A C G T A C G T C G A T A G T C G A C T A T C G G T C A T A G C G C T A G T C A G T C A C G T A A C T G C G T A C G T A
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TCTGACAAAAGAA----
---GAGAACCGAAACTG
 C G A T A G T C G A C T A T C G G T C A T A G C G C T A G T C A G T C A C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

Mecom/MA0029.1/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TCTGACAAAAGAA----
---AAGATAAGATAACA
 C G A T A G T C G A C T A T C G G T C A T A G C G C T A G T C A G T C A C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A