Information for 23-CACAGGGTCTGCTGGG (Motif 33)

A G T C C G T A A G T C C G T A A C T G A C T G A C T G A C G T A G T C A C G T A C T G A G T C C G A T A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C C G T A C T A G A G T C C G T A C T A G C G T A A G T C T G A C A G T C A C G T C T A G A C G T A C T G
p-value:1e-6
log p-value:-1.470e+01
Information Content per bp:1.918
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.3 +/- 4.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CACAGGGTCTGCTGGG----
-----RGSMTBCTGGGAAAT
 A G T C C G T A A G T C C G T A A C T G A C T G A C T G A C G T A G T C A C G T A C T G A G T C C G A T A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CACAGGGTCTGCTGGG
CACAGN----------
 A G T C C G T A A G T C C G T A A C T G A C T G A C T G A C G T A G T C A C G T A C T G A G T C C G A T A C T G A C T G A C T G
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:3
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CACAGGGTCTGCTGGG
GVACAGNMTGTYCTB--
 A C G T A G T C C G T A A G T C C G T A A C T G A C T G A C T G A C G T A G T C A C G T A C T G A G T C C G A T A C T G A C T G A C T G
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:4
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CACAGGGTCTGCTGGG
--CAACGTCCGCGG--
 A G T C C G T A A G T C C G T A A C T G A C T G A C T G A C G T A G T C A C G T A C T G A G T C C G A T A C T G A C T G A C T G
A C G T A C G T A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CACAGGGTCTGCTGGG
--VBSYGTCTGG----
 A G T C C G T A A G T C C G T A A C T G A C T G A C T G A C G T A G T C A C G T A C T G A G T C C G A T A C T G A C T G A C T G
A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CACAGGGTCTGCTGGG
GRACAGWMTGTYCTB--
 A C G T A G T C C G T A A G T C C G T A A C T G A C T G A C T G A C G T A G T C A C G T A C T G A G T C C G A T A C T G A C T G A C T G
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G A C G T A C G T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--CACAGGGTCTGCTGGG
AGNACAGNCTGTTCTN--
 A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C T G A C T G A C G T A G T C A C G T A C T G A G T C C G A T A C T G A C T G A C T G
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T A C G T A C G T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--CACAGGGTCTGCTGGG
AGNACANNNTGTNCTN--
 A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C T G A C T G A C G T A G T C A C G T A C T G A G T C C G A T A C T G A C T G A C T G
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.49
Offset:4
Orientation:forward strand
Alignment:CACAGGGTCTGCTGGG
----CTGTCTGG----
 A G T C C G T A A G T C C G T A A C T G A C T G A C T G A C G T A G T C A C G T A C T G A G T C C G A T A C T G A C T G A C T G
A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:CACAGGGTCTGCTGGG---
----TNTCCTGCTGTGNNG
 A G T C C G T A A G T C C G T A A C T G A C T G A C T G A C G T A G T C A C G T A C T G A G T C C G A T A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G