Information for 18-GACAAAGCAAATTGAT (Motif 23)

A C T G C G T A G T A C C G T A C G T A C G T A A C T G A T G C C T G A C T G A C G T A A C G T C G A T A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C C G T A G T C A A C G T A G C T A G C T A T C G A G T C C G A T A C G T A C G T A C T G A C G T A G T C
p-value:1e-8
log p-value:-2.040e+01
Information Content per bp:1.916
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.2 +/- 26.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GACAAAGCAAATTGAT
AAACAGACAAAGGAAT-----
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A G T A C C G T A C G T A C G T A A C T G A T G C C T G A C T G A C G T A A C G T C G A T A C T G C G T A A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GACAAAGCAAATTGAT
VRRACAAWGG--------
 A C G T A C G T A C T G C G T A G T A C C G T A C G T A C G T A A C T G A T G C C T G A C T G A C G T A A C G T C G A T A C T G C G T A A C G T
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GACAAAGCAAATTGAT
-ACAAAG---------
 A C T G C G T A G T A C C G T A C G T A C G T A A C T G A T G C C T G A C T G A C G T A A C G T C G A T A C T G C G T A A C G T
A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:4
Score:0.58
Offset:10
Orientation:reverse strand
Alignment:GACAAAGCAAATTGAT----
----------ATTGATTYND
 A C T G C G T A G T A C C G T A C G T A C G T A A C T G A T G C C T G A C T G A C G T A A C G T C G A T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GACAAAGCAAATTGAT
GGAACAAAGR--------
 A C G T A C G T A C T G C G T A G T A C C G T A C G T A C G T A A C T G A T G C C T G A C T G A C G T A A C G T C G A T A C T G C G T A A C G T
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GACAAAGCAAATTGAT
AAAACAAAGG--------
 A C G T A C G T A C T G C G T A G T A C C G T A C G T A C G T A A C T G A T G C C T G A C T G A C G T A A C G T C G A T A C T G C G T A A C G T
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GACAAAGCAAATTGAT
RACAAWGG--------
 A C T G C G T A G T A C C G T A C G T A C G T A A C T G A T G C C T G A C T G A C G T A A C G T C G A T A C T G C G T A A C G T
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SOX8/MA0868.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GACAAAGCAAATTGAT
AACACTGCACATTGTT
 A C T G C G T A G T A C C G T A C G T A C G T A A C T G A T G C C T G A C T G A C G T A A C G T C G A T A C T G C G T A A C G T
C T G A C G T A A G T C G T C A G T A C A C G T T A C G T G A C C G T A G A T C G T C A A C G T A G C T A C T G A C G T C G A T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:9
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:GACAAAGCAAATTGAT--
--------TAATTGATTA
 A C T G C G T A G T A C C G T A C G T A C G T A A C T G A T G C C T G A C T G A C G T A A C G T C G A T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GACAAAGCAAATTGAT
-ACAAAGGNBCCT---
 A C T G C G T A G T A C C G T A C G T A C G T A A C T G A T G C C T G A C T G A C G T A A C G T C G A T A C T G C G T A A C G T
A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T A C G T A C G T