Information for 11-AMTTGAGGATTANTCA (Motif 11)

G T C A G T C A C G A T A G C T A T C G C G T A A C T G T A C G C G T A A C G T A G C T C G T A A C T G A C G T G T A C C G T A
Reverse Opposite:
A C G T A C T G G T C A A G T C C G A T C T G A C G T A A C G T A T G C G T A C A C G T A T G C T C G A C G T A A C G T A C G T
p-value:1e-11
log p-value:-2.631e+01
Information Content per bp:1.740
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.8 +/- 23.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:1
Score:0.61
Offset:6
Orientation:forward strand
Alignment:AMTTGAGGATTANTCA
------TCATCAATCA
 G T C A G T C A C G A T A G C T A T C G C G T A A C T G T A C G C G T A A C G T A G C T C G T A A C T G A C G T G T A C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A

PH0138.1_Pitx2/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AMTTGAGGATTANTCA--
-TGAAGGGATTAATCATC
 G T C A G T C A C G A T A G C T A T C G C G T A A C T G T A C G C G T A A C G T A G C T C G T A A C T G A C G T G T A C C G T A A C G T A C G T
A C G T C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

OTX2/MA0712.1/Jaspar

Match Rank:3
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:AMTTGAGGATTANTCA
-----NGGATTAA---
 G T C A G T C A C G A T A G C T A T C G C G T A A C T G T A C G C G T A A C G T A G C T C G T A A C T G A C G T G T A C C G T A
A C G T A C G T A C G T A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:4
Score:0.60
Offset:4
Orientation:forward strand
Alignment:AMTTGAGGATTANTCA----
----GAAGATCAATCACTTA
 G T C A G T C A C G A T A G C T A T C G C G T A A C T G T A C G C G T A A C G T A G C T C G T A A C T G A C G T G T A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

GSC2/MA0891.1/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AMTTGAGGATTANTCA
----GNGGATTAGN--
 G T C A G T C A C G A T A G C T A T C G C G T A A C T G T A C G C G T A A C G T A G C T C G T A A C T G A C G T G T A C C G T A
A C G T A C G T A C G T A C G T C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:6
Score:0.59
Offset:5
Orientation:forward strand
Alignment:AMTTGAGGATTANTCA
-----RGGATTAR---
 G T C A G T C A C G A T A G C T A T C G C G T A A C T G T A C G C G T A A C G T A G C T C G T A A C T G A C G T G T A C C G T A
A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:7
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AMTTGAGGATTANTCA
----VRGGATTARN--
 G T C A G T C A C G A T A G C T A T C G C G T A A C T G T A C G C G T A A C G T A G C T C G T A A C T G A C G T G T A C C G T A
A C G T A C G T A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T A C G T

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:8
Score:0.59
Offset:6
Orientation:forward strand
Alignment:AMTTGAGGATTANTCA--
------NNATGASTCATH
 G T C A G T C A C G A T A G C T A T C G C G T A A C T G T A C G C G T A A C G T A G C T C G T A A C T G A C G T G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G T C G A C G A T C A T G G C T A A T C G C G A T G T A C G C T A A G C T G T A C

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AMTTGAGGATTANTCA
----NGGGATTA----
 G T C A G T C A C G A T A G C T A T C G C G T A A C T G T A C G C G T A A C G T A G C T C G T A A C T G A C G T G T A C C G T A
A C G T A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AMTTGAGGATTANTCA
----NNGGATTAGN--
 G T C A G T C A C G A T A G C T A T C G C G T A A C T G T A C G C G T A A C G T A G C T C G T A A C T G A C G T G T A C C G T A
A C G T A C G T A C G T A C G T C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T A C G T