Information for 19-GTGGTCAGTTAAT (Motif 28)

A C T G A C G T A C T G A C T G A C G T A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T C G T A C G T A A G T C A C G T A C T G C G T A A G T C A G T C C G T A A G T C
p-value:1e-3
log p-value:-7.932e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.5 +/- 33.0bp
Average Position of motif in Background46.9 +/- 7.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:1
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GTGGTCAGTTAAT
---GGCVGTTR--
 A C T G A C G T A C T G A C T G A C G T A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T
A C G T A C G T A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTGGTCAGTTAAT-----
-NNNTTAGTTAACTNANN
 A C T G A C G T A C T G A C T G A C G T A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

Myb/MA0100.2/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GTGGTCAGTTAAT
--TGGCAGTTGN-
 A C T G A C G T A C T G A C T G A C G T A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T
A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTGGTCAGTTAAT
AGRGGTCA------
 A C G T A C T G A C G T A C T G A C T G A C G T A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GTGGTCAGTTAAT
--BRRCVGTTDN-
 A C T G A C G T A C T G A C T G A C G T A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T
A C G T A C G T A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTGGTCAGTTAAT--
NNNTGGCAGTTGGTNN
 A C G T A C T G A C G T A C T G A C T G A C G T A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

Lhx3/MA0135.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GTGGTCAGTTAAT--
--GATTAATTAATTT
 A C T G A C G T A C T G A C T G A C G T A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T T C A G C T G A G C A T C G A T C T G A C G T A A C G T C G A T C G T A C G T A C G A T A C G T G C A T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GTGGTCAGTTAAT
CTCCAGGGGTCAATTGA-
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A C G T A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GTGGTCAGTTAAT
--TGGCAGTTGG-
 A C T G A C G T A C T G A C T G A C G T A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T
A C G T A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:10
Score:0.57
Offset:7
Orientation:forward strand
Alignment:GTGGTCAGTTAAT--
-------GKTAATGR
 A C T G A C G T A C T G A C T G A C G T A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A